Results 21 to 30 of about 7,548,191 (313)

Tissue-specific transcriptome responses to Fusarium head blight and Fusarium root rot

Frontiers in Plant Science, 2022
Fusarium head blight (FHB) and Fusarium root rot (FRR) are important diseases of small-grain cereals caused by Fusarium species. While host response to FHB has been subject to extensive study, very little is known about response to FRR and the ...
John Francis Haidoulis, Paul Nicholson
doaj   +1 more source

REGENOMICS: A web-based application for plant REGENeration-associated transcriptOMICS analyses

Computational and Structural Biotechnology Journal, 2022
In plants, differentiated somatic cells exhibit an exceptional ability to regenerate new tissues, organs, or whole plants. Recent studies have unveiled core genetic components and pathways underlying cellular reprogramming and de novo tissue regeneration
Soon Hyung Bae, Yoo-Sun Noh, Pil Joon Seo   +2 more
doaj   +1 more source

Genome Wide Transcriptome Analysis of Dendritic Cells Identifies Genes with Altered Expression in Psoriasis [PDF]

, 2013
Activation of dendritic cells by different pathogens induces the secretion of proinflammatory mediators resulting in local inflammation. Importantly, innate immunity must be properly controlled, as its continuous activation leads to the development of ...
Szász, András, István Nagy (147904), Vilmos Tubak (455817), Kemény Lajos, Kondorosi, Éva, András Szász, Zoltán Hegedűs (455815), Tubak Vilmos, Lajos Kemény, Éva Kondorosi (3507242), Kata Filkor (455814), Kondorosi Éva, Nagy István, Tubák, Vilmos, Lajos Kemény (229288), Hegedűs Zoltán, Szász András, István Nagy, Kemény, Lajos, Éva Kondorosi, Nagy, István, Filkor, Katalin, Vilmos Tubak, Filkor Kata, Hegedűs, Zoltán, András Szász (455816), Kata Filkor, Zoltán Hegedűs   +27 more
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The first decade and beyond of transcriptional profiling in schizophrenia

Neurobiology of Disease, 2012
Gene expression changes in brains of individuals with schizophrenia (SZ) have been hypothesized to reflect possible pathways related to pathophysiology and/or medication.
P. Adolfo Sequeira, Maureen V. Martin, Marquis P. Vawter   +2 more
doaj   +1 more source

CrustyBase: an interactive online database for crustacean transcriptomes

BMC Genomics, 2020
Transcriptome sequencing has opened the field of genomics to a wide variety of researchers, owing to its efficiency, applicability across species and ability to quantify gene expression. The resulting datasets are a rich source of information that can be
Cameron J. Hyde, Quinn P. Fitzgibbon, Abigail Elizur, Gregory G. Smith, Tomer Ventura   +4 more
doaj   +1 more source

DEclust: A statistical approach for obtaining differential expression profiles of multiple conditions. [PDF]

PLoS ONE, 2017
High-throughput RNA sequencing technology is widely used to comprehensively detect and quantify cellular gene expression. Thus, numerous analytical methods have been proposed for identifying differentially expressed genes (DEGs) between paired samples ...
Yoshimasa Aoto, Tsuyoshi Hachiya, Kazuhiro Okumura, Sumitaka Hase, Kengo Sato, Yuichi Wakabayashi, Yasubumi Sakakibara   +6 more
doaj   +1 more source

Mouse p53-deficient cancer models as platforms for obtaining genomic predictors of human cancer clinical outcomes [PDF]

, 2012
Mutations in the TP53 gene are very common in human cancers, and are associated with poor clinical outcome. Transgenic mouse models lacking the Trp53 gene or that express mutant Trp53 transgenes produce tumours with malignant features in many organs.
Miquel Taron, Jesús M Paramio, Martín Jiménez, Miguel, Pedro Larrañaga, Martínez-Cruz, Ana B., Lorz, Corina, Juan F Aranda, Corina Lorz (145432), Rafael Rosell (145450), García-Escudero Ramón, Santos Mirentxu, Stathopoulos George P., Concha Bielza, Ciruelos, Eva M., Mirentxu Santos, Dahabreh Jubrail, Ana B Martínez-Cruz, Bielza Concha, George P. Stathopoulos (145448), Pedro Larrañaga (145444), Aranda Juan F., Marta Dueñas, Rodríguez-Peralto José L., Corina Lorz, Rosell, Rafael, Martínez-Cruz Ana B., Lorz Corina, Dueñas Marta, Marta Dueñas (145419), Taron Miquel, Miquel Taron (145434), Santos, Mirentxu, Larrañaga Pedro, Dueñas, Marta, Jubrail Dahabreh, Ramón García-Escudero, José L Rodríguez-Peralto, Ana B. Martínez-Cruz (145430), Eva M Ciruelos, Rosell Rafael, Dahabreh, Jubrail, Jesús M. Paramio (145453), Miguel Martín, José L. Rodríguez-Peralto (145441), Larrañaga Múgica, Pedro María, Ciruelos Eva M., Ramón García-Escudero (3914537), Eva M. Ciruelos (145438), Taron, Miquel, Paramio, Jesús M., Juan F. Aranda (145425), Jubrail Dahabreh (145446), García-Escudero, Ramón, Martín Miguel, Paramio Jesús M., Aranda, Juan F., George P Stathopoulos, Bielza, Concha, Miguel Martín (3443171), Stathopoulos, George P., Mirentxu Santos (145422), Concha Bielza (145428), Rodríguez-Peralto, José L., Rafael Rosell   +63 more
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Regional regulation of transcription in the chicken genome [PDF]

, 2010
Background Over the past years, the relationship between gene transcription and chromosomal location has been studied in a number of different vertebrate genomes. Regional differences in gene expression have been found in several different species.
Nie, H., Crooijmans, R.P.M.A., Groenen, M.A.M., Bastiaansen, J.W.M., Megens, H.J.W.C., Richard PMA Crooijmans, Martien AM Groenen, Haisheng Nie, John WM Bastiaansen, Hendrik-Jan Megens   +9 more
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Construction of Pará rubber tree genome and multi-transcriptome database accelerates rubber researches

BMC Genomics, 2018
Background Natural rubber is an economically important material. Currently the Pará rubber tree, Hevea brasiliensis is the main commercial source. Little is known about rubber biosynthesis at the molecular level.
Yuko Makita, Mika Kawashima, Nyok Sean Lau, Ahmad Sofiman Othman, Minami Matsui   +4 more
doaj   +1 more source

High-throughput SuperSAGE for digital gene expression analysis of multiple samples using next generation sequencing [PDF]

, 2010
We established a protocol of the SuperSAGE technology combined with next-generation sequencing, coined "High- Throughput (HT-) SuperSAGE". SuperSAGE is a method of digital gene expression profiling that allows isolation of 26-bp tag fragments from ...
Schroth, G.P., Terauchi, Ryohei, Hideo Matsumura, Krüger Detlev H., Kentaro Yoshida, Kahl, G., Takahiro Fujibe, Luo, Shujun, Fujibe, T., Terauchi Ryohei, Eiji Kimura, Yoshida Kentaro, Luo, S., Shujun Luo, Barrero, R.A., Schroth, Gary P., Detlev H Krüger, Albertyn, Z., Ryohei Terauchi, Roberto A Barrero, Kahl Günter, Luo Shujun, Albertyn Zayed, Gary P. Schroth, Matsumura, Hideo, Yoshida, K., Fujibe, Takahiro, Schroth Gary P., Krüger, D.H., Kahl, Günter, Krüger, Detlev H., Kimura, Eiji, Gary P Schroth, Matsumura Hideo, Barrero Roberto A., Zayed Albertyn, Kimura, E., Terauchi, R., Kimura Eiji, Detlev H. Krüger, Albertyn, Zayed, Matsumura, H., Yoshida, Kentaro, Fujibe Takahiro, Barrero, Roberto A., Roberto A. Barrero, Günter Kahl, Kahl, Guenter, Schroth, Gary P, Krueger, Detlev H, Barrero, Roberto A   +50 more
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