Results 71 to 80 of about 2,371,477 (389)
Global transposable characteristics in the yeast complete DNA sequence [PDF]
, 2010 Global transposable characteristics in the complete DNA sequence of the Saccharomyces cevevisiae yeast is determined by using the metric representation and recurrence plot methods.
Wu, Zuo-Bing
core +2 more sources
Transposable Element Targeting by piRNAs in Laurasiatherians with Distinct Transposable Element Histories [PDF]
Genome Biology and Evolution, 2016 (Uploaded by Plazi for the Bat Literature Project) PIWI proteins and PIWI-interacting RNAs (piRNAs) are part of a cellular pathway that has evolved to protect genomes against the proliferation of transposable elements (TEs). PIWIs and piRNAs assemble into complexes that are involved in epigenetic and posttranscriptional repression of TEs.
Michael W. Vandewege +3 more
openaire +3 more sources
bioRxiv, 2018 Characterization of Human Endogenous Retrovirus (HERV) expression within the transcriptomic landscape using RNA-seq is complicated by uncertainty in fragment assignment because of sequence similarity.
M. Bendall +14 more
semanticscholar +1 more source
PASTEC: an automatic transposable element classification tool.
PLoS ONE, 2014 SummaryThe classification of transposable elements (TEs) is key step towards deciphering their potential impact on the genome. However, this process is often based on manual sequence inspection by TE experts.
Claire Hoede +6 more
doaj +1 more source
Biased exonization of transposed elements in duplicated genes: A lesson from the TIF-IA gene [PDF]
BMC Molecular Biology 2007, 8:109, 2008 Background: Gene duplication and exonization of intronic transposed elements are two mechanisms that enhance genomic diversity. We examined whether there is less selection against exonization of transposed elements in duplicated genes than in single-copy genes.
arxiv +1 more source
Nature Communications, 2019 Polyploidization is frequently associated with increased transposable element (TE) content. However, what drives TE dynamics following whole genome duplication (WGD) and the evolutionary implications remain unclear.
P. Baduel +4 more
semanticscholar +1 more source
Molecular Oncology, EarlyView.CD226+CD8+ T cells express elevated levels of RUNX2, exhibit higher proliferation capacity, cytokines and cytolytic molecules expression, and migratory capacity. In contrast, CD226−CD8+ T cells display an exhausted phenotype associated with the increased expression of co‐inhibitory receptors and impaired effector functions.
Maryam Rezaeifar +4 more
wiley +1 more source
Tools and best practices for retrotransposon analysis using high-throughput sequencing data
Mobile DNA, 2019 Background Sequencing technologies give access to a precise picture of the molecular mechanisms acting upon genome regulation. One of the biggest technical challenges with sequencing data is to map millions of reads to a reference genome. This problem is
Aurélie Teissandier +3 more
doaj +1 more source
Structure and properties of the algebra of partially transposed permutation operators [PDF]
Journal Of Mathematical Physics 55, 032202 (2014), 2013 We consider the structure of algebra of operators, acting in $n-$fold tensor product space, which are partially transposed on the last term. Using purely algebraical methods we show that this algebra is semi-simple and then, considering its regular representation, we derive basic properties of the algebra.
arxiv +1 more source
BMC Evolutionary Biology, 2019 BackgroundTransposable elements (TEs) are a major component of metazoan genomes and are associated with a variety of mechanisms that shape genome architecture and evolution.
Malte Petersen +8 more
semanticscholar +1 more source