Results 41 to 50 of about 4,914,786 (311)

A Comprehensive Phylogenomic Platform for Exploring the Angiosperm Tree of Life

bioRxiv, 2021
The tree of life is the fundamental biological roadmap for navigating the evolution and properties of life on Earth, and yet remains largely unknown.
W. Baker, Paul Bailey, V. Barber, Abigail L. Barker, S. Bellot, David Bishop, Laura R. Botigué, G. Brewer, T. Carruthers, J. J. Clarkson, Jeffrey J. Cook, R. Cowan, S. Dodsworth, Niroshini Epitawalage, E. Françoso, Berta Gallego, Matthew G. Johnson, Jan T. Kim, Kevin Leempoel, O. Maurin, Catherine McGinnie, L. Pokorny, Shyamali Roy, M. Stone, E. Toledo, N. Wickett, A. Zuntini, W. Eiserhardt, P. Kersey, I. Leitch, F. Forest   +30 more
semanticscholar   +1 more source

Host biology and genomic properties of Plumeria mosaic virus, a tobamovirus discovered in a temple tree in India co-infecting with frangipani mosaic virus

Frontiers in Microbiology, 2022
Temple tree (Plumeria rubra f. acutifolia), an important fragrant-flower tree extensively used in the urban landscaping is known to be infected with a tobamovirus, frangipani mosaic virus (FrMV).
Alok Kumar, Alok Kumar, Vikas Solanki, Akshay Katiyar, Bikash Mandal   +4 more
doaj   +1 more source

mbonsai: Application Package for Sequence Classification by Tree Methodology

Journal of Statistical Software, 2018
In many applications such as transaction data analysis, the classification of long chains of sequences is required. For example, brand purchase history in customer transaction data is in a form like AABCABAA, where A, B, and C are brands of a consumer ...
Yukinobu Hamuro, Masakazu Nakamoto, Stephane Cheung, Edward H. Ip   +3 more
doaj   +1 more source

Sequence Comparison Alignment-Free Approach Based on Suffix Tree and L-Words Frequency

The Scientific World Journal, 2012
The vast majority of methods available for sequence comparison rely on a first sequence alignment step, which requires a number of assumptions on evolutionary history and is sometimes very difficult or impossible to perform due to the abundance of gaps ...
Inês Soares, Ana Goios, António Amorim
doaj   +1 more source

Draft genome sequence of the rubber tree Hevea brasiliensis

BMC Genomics, 2013
Background Hevea brasiliensis, a member of the Euphorbiaceae family, is the major commercial source of natural rubber (NR). NR is a latex polymer with high elasticity, flexibility, and resilience that has played a critical role in the world economy since
Rahman Ahmad Yamin Abdul, Usharraj Abhilash O, Misra Biswapriya B, Thottathil Gincy P, Jayasekaran Kandakumar, Feng Yun, Hou Shaobin, Ong Su Yean, Ng Fui Ling, Lee Ling Sze, Tan Hock Siew, Sakaff Muhd Khairul Luqman Muhd, Teh Beng Soon, Khoo Bee, Badai Siti Suriawati, Aziz Nurohaida Ab, Yuryev Anton, Knudsen Bjarne, Dionne-Laporte Alexandre, Mchunu Nokuthula P, Yu Qingyi, Langston Brennick J, Freitas Tracey Allen K, Young Aaron G, Chen Rui, Wang Lei, Najimudin Nazalan, Saito Jennifer A, Alam Maqsudul   +28 more
doaj   +1 more source

Estimating dispersal rates and locating genetic ancestors with genome-wide genealogies

eLife
Spatial patterns in genetic diversity are shaped by individuals dispersing from their parents and larger-scale population movements. It has long been appreciated that these patterns of movement shape the underlying genealogies along the genome leading to
Matthew Osmond, Graham Coop
doaj   +1 more source

Natural Language Generation Using Dependency Tree Decoding for Spoken Dialog Systems

IEEE Access, 2019
In this paper, we propose a new natural language generation (NLG) method for spoken dialog systems and demonstrate its capacity. Studies on NLG often employ sequence decoding, which generates the words comprising a sentence in sequential order and uses ...
Youngmin Park, Sangwoo Kang
doaj   +1 more source

SNP identification from RNA sequencing and linkage map construction of rubber tree for anchoring the draft genome. [PDF]

PLoS ONE, 2015
Hevea brasiliensis, or rubber tree, is an important crop species that accounts for the majority of natural latex production. The rubber tree nuclear genome consists of 18 chromosomes and is roughly 2.15 Gb.
Jeremy R Shearman, Duangjai Sangsrakru, Nukoon Jomchai, Panthita Ruang-Areerate, Chutima Sonthirod, Chaiwat Naktang, Kanikar Theerawattanasuk, Somvong Tragoonrung, Sithichoke Tangphatsornruang   +8 more
doaj   +1 more source

Exploring and retrieving sequence and metadata for species across the tree of life with NCBI Datasets

Scientific Data
To explore complex biological questions, it is often necessary to access various data types from public data repositories. As the volume and complexity of biological sequence data grow, public repositories face significant challenges in ensuring that the
Nuala A O'Leary, Eric Cox, J. B. Holmes, W. R. Anderson, R. Falk, Vichet Hem, Mirian T N Tsuchiya, Gregory D. Schuler, Xuan Zhang, John P Torcivia, Anne Ketter, Laurie Breen, Jonathan Cothran, H. Bajwa, Jovany Tinne, Peter A. Meric, W. Hlavina, Valerie A Schneider   +17 more
semanticscholar   +1 more source

Phylogenomic Resolution of the Cetacean Tree of Life Using Target Sequence Capture

Systematic Biology, 2019
The evolution of cetaceans, from their early transition to an aquatic lifestyle to their subsequent diversification, has been the subject of numerous studies.
M. McGowen, G. Tsagkogeorga, Sandra Álvarez-Carretero, Mario dos Reis, Monika Struebig, R. Deaville, P. Jepson, S. Jarman, A. Polanowski, P. Morin, S. Rossiter   +10 more
semanticscholar   +1 more source