Identification of Key Pathways and Genes in the Dynamic Progression of HCC Based on WGCNA [PDF]
Yin Li +3 more
exaly +2 more sources
Candidate Biomarkers and Molecular Mechanism Investigation for Glioblastoma Multiforme Utilizing WGCNA [PDF]
To reveal the potential molecular mechanism of glioblastoma multiforme (GBM) and provide the candidate biomarkers for GBM gene therapy. Microarray dataset GSE50161 was obtained from GEO database. The differentially expressed genes (DEGs) were identified between GBM samples and control samples, followed by the module partition analysis based on WGCNA ...
Qi Yang, Bo Wei, Daliang Kong
exaly +3 more sources
Related searches:
Identifying novel candidate biomarkers of RCC based on WGCNA analysis
Personalized Medicine, 2018Extracting differential expression genes (DEGs) is an effective approach to improve the accuracy of determining the candidate biomarker genes. However, the previous DEGs analysis methods ignore that the expression levels of genes in different pathology stages of cancers are complex and various.In our study, staging DEGs analysis and weighted gene co ...
Jin, Deng +4 more
openaire +2 more sources
Application of WGCNA and PloGO2 in the Analysis of Complex Proteomic Data
2021In this protocol we describe our workflow for analyzing complex, multi-condition quantitative proteomic experiments, with the aim to extract biological insights. The tool we use is an R package, PloGO2, contributed to Bioconductor, which we can optionally precede by running correlation network analysis with WGCNA.
Jemma X, Wu +4 more
openaire +2 more sources
[WGCNA screening of prognostic markers in medulloblastoma].
Zhonghua yi xue za zhi, 2020Objective: In this study, we used the Weighted gene co-expression network analysis (WGCNA) analysis to find the gene module that are specifically expressed in Medulloblastoma and screened the marker genes that may diagnose and treat Medulloblastoma. Methods: WGCNA was used to identify the gene modules that are specifically associated with suvival in ...
B S, Du, L, Yuan, L G, Sun, Z Y, Zhang
openaire +1 more source
Identification of susceptibility modules and characteristic genes to osteoarthritis by WGCNA
Annales de Biologie CliniqueThe susceptibility modules and characteristic genes of patients with osteoarthritis (OA) were determined by weighted gene co-expression network analysis (WGCNA), and the role of immune cells in OA related microenvironment was analyzed. GSE98918 and GSE117999 data sets are from GEO database. R language was used to conduct difference analysis for the new
He-Jun, Hu +5 more
openaire +2 more sources
Organic Rankine Cycle Performance Analysis Based on WGCNA
2023 China Automation Congress (CAC), 2023Fan Chen +4 more
openaire +1 more source
Identification of crucial genes in aortic dissection by WGCNA
Atherosclerosis, 2021H. Zhang +6 more
openaire +1 more source
Insights into the plateau adaptation of Salvia castanea by comparative genomic and WGCNA analyses
Journal of Advanced Research, 2022Najeeb Ullah, Weijun Zhou
exaly
GWAS and WGCNA uncover hub genes controlling salt tolerance in maize (Zea mays L.) seedlings
Theoretical and Applied Genetics, 2021Guangtang Pan, Yaou Shen
exaly

