Results 71 to 80 of about 533,077 (310)

Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India

Data in Brief, 2018
This article describes the whole genome sequencing data from 5 extrapulmonary tuberculosis clinical isolates. The whole genome sequencing was carried out on Illumina MiSeq platform to identify single nucleotide variations (SNVs) associated with drug ...
Jayshree Advani, Kusum Sharma, Renu Verma, Oishi Chatterjee, Hitendra S. Solanki, Aman Sharma, Subhash Varma, Manish Modi, Pallab Ray, Megha Sharma, M.S. Dhillion, Akhilesh Pandey, Harsha Gowda, T.S. Keshava Prasad   +13 more
doaj   +1 more source

Whole-Genome Sequencing and Target Validation Analysis of Müllerian Adenosarcoma: A Tumor With Complex but Specific Genetic Alterations [PDF]

, 2020
Yanli Ban, Jean Victoria Fischer, Kruti P. Maniar, Haiyang Guo, Chang Zeng, Yinuo Li, Qing Zhang, Xinkun Wang, Wei Zhang, Serdar E. Bulun, Jian‐Jun Wei   +10 more
openalex   +1 more source

Mortality in Sea Lions is associated with the introduction of the H5N1 clade 2.3.4.4b virus in Brazil, October 2023: Whole genome sequencing and phylogenetic analysis [PDF]

, 2023
Andreina Carvalho de Araújo, Andrew Y. Cho, Laura Morais Nascimento Silva, Thaís Camilo Corrêa, Gabriela Cristini de Souza, Adriana Silva Albuquerque, Eduardo Macagnan, Cristiane K. M. Kolesnikvoas, Rafael Meurer, Jenyffer Vierheller Vieira, Giulia Gaglianone Lemos, André S. Barreto, Jeferson Luis Dick, Karina Rejane Groch, Pedro Volkmer de Castilho, Deyvid Amgarten, Fernanda de Mello Malta, Michael E. Miller, Erick Gustavo Dorlass, Soledad Palameta, Sun-Hak Lee, Clarice Weis Arns, Edison Luíz Durigon, João Renato Rebello Pinho, Dong‐Hun Lee, Helena Lage Ferreira   +25 more
openalex   +1 more source

Molecular characterisation of human penile carcinoma and generation of paired epithelial primary cell lines

Molecular Oncology, EarlyView.
Generation of two normal and tumour (cancerous) paired human cell lines using an established tissue culture technique and their characterisation is described. Cell lines were characterised at cellular, protein, chromosome and gene expression levels and for HPV status.
Simon Broad, Mahmood Hachim, Tom Bertin, Karolina Penderecka, Rifat Hamoudi, Saif Khan, Rui Henrique, Natalie Bergmoser, Manit Arya, Kalle Sipila, Matteo Vietri Rudan, Asif Muneer, Aamir Ahmed   +12 more
wiley   +1 more source

Cis‐regulatory and long noncoding RNA alterations in breast cancer – current insights, biomarker utility, and the critical need for functional validation

Molecular Oncology, EarlyView.
The noncoding region of the genome plays a key role in regulating gene expression, and mutations within these regions are capable of altering it. Researchers have identified multiple functional noncoding mutations associated with increased cancer risk in the genome of breast cancer patients.
Arnau Cuy Saqués, Aracele Martinez‐Mendez, John Crown, Alex Eustace   +3 more
wiley   +1 more source

Use of whole-genome sequencing to investigate a cluster of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infections in emergency department personnel

, 2021
E. Ricky Chan, Lucas D. Jones, Sarah N. Redmond, Maria E. Navas, Nataliya M. Kachaluba, Trina F. Zabarsky, Davinder Bhullar, Jennifer L. Cadnum, Peter A. Zimmerman, Curtis J. Donskey   +9 more
openalex   +2 more sources

Author Correction: Estimation of the mutation rate of Mycobacterium tuberculosis in cases with recurrent tuberculosis using whole genome sequencing [PDF]

, 2023
Jéssica Comín, Alberto Cebollada, María José Iglesias, Daniel Ibarz, Jesús Viñuelas, Luis Torres Carretero, Juan Sahagún, María Carmen Lafoz, Felipe Esteban Juanas, María Carmen Malo, Sofía Samper, Sofía Samper   +11 more
openalex   +1 more source

Methylation biomarkers can distinguish pleural mesothelioma from healthy pleura and other pleural pathologies

Molecular Oncology, EarlyView.
We developed and validated a DNA methylation–based biomarker panel to distinguish pleural mesothelioma from other pleural conditions. Using the IMPRESS technology, we translated this panel into a clinically applicable assay. The resulting two classifier models demonstrated excellent performance, achieving high AUC values and strong diagnostic accuracy.
Janah Vandenhoeck, Nele De Meulenaere, Thomas Vanpoucke, Joe Ibrahim, Dieter Peeters, Suresh Krishan Yogeswaran, Wen Wen, Paul Van Schil, Jeroen M. H. Hendriks, Jo Raskin, Jan van Meerbeeck, Guy Van Camp, Ken Op de Beeck   +12 more
wiley   +1 more source

Whole-Genome Sequencing and Epidemiological Investigation of Tuberculosis Outbreaks in High Schools in Hunan, China

Infection and Drug Resistance, 2022
Zuhui Xu,1,2,* Haican Liu,3,* Yanping Liu,4,* Yi Tang,2 Yunhong Tan,2 Peilei Hu,2 Chuanfang Zhang,2 Chongguang Yang,4 Kanglin Wan,3 Qiaozhi Wang2 1Xiangya School of Public Health, Central South University, Changsha, 410078, People’s Republic ...
Xu Z, Liu H, Liu Y, Tang Y, Tan Y, Hu P, Zhang C, Yang C, Wan K, Wang Q   +9 more
doaj  

Identifying insertion mutations by whole-genome sequencing

BioTechniques, 2011
Insertion mutagenesis via mobile genetic element is a common technique for the analysis of gene function in model organisms. Next-generation sequencing offers an attractive approach for localizing the site of insertion, but alignment-based mapping of ...
Harold E. Smith
doaj   +1 more source