Detailed evaluation of data analysis tools for subtyping of bacterial isolates based on whole genome sequencing : Neisseria meningitidis as a proof of concept [PDF]
Whole genome sequencing is increasingly recognized as the most informative approach for characterization of bacterial isolates. Success of the routine use of this technology in public health laboratories depends on the availability of well-characterized ...
Bertrand, Sophie +5 more
core +1 more source
AiiDAlab – an ecosystem for developing, executing, and sharing scientific workflows [PDF]
Cloud platforms allow users to execute tasks directly from their web browser and are a key enabling technology not only for commerce but also for computational science.
Aliaksandr V. Yakutovich +12 more
semanticscholar +1 more source
Currently, due to a decrease in the volume of possible timber extraction in relatively convenient areas characterized by favorable natural relief, the development of logging technologies and appropriate logging equipment for work on steep slopes becomes ...
Lagerev I.A. +2 more
doaj +1 more source
Think global, cube local: an Earth Observation Data Cube’s contribution to the Digital Earth vision
The technological landscape for managing big Earth observation (EO) data ranges from global solutions on large cloud infrastructures with web-based access to self-hosted implementations. EO data cubes are a leading technology for facilitating big EO data
Martin Sudmanns +7 more
doaj +1 more source
An approach to safety analysis of clinical workflows [PDF]
A clinical workflow considers the information and processes that are involved in providing a clinical service. They are safety critical since even minor faults have the potential to propagate and consequently cause harm to a patient, or even for a ...
Al-Qora'n, Lamis +5 more
core +1 more source
Open Bibliographical Data Workflows and the Multilinguality Challenge
The aim of the paper is to present and analyze workflows for bibliographical data curation and research that were created during the ‘Open Bibliodata Workflows’ project realised by the Bibliographical Data Working Group from the DARIAH ERIC consortium ...
Vojtěch Malínek +13 more
doaj +1 more source
MSCAT: A Machine Learning Assisted Catalog of Metabolomics Software Tools
The bottleneck for taking full advantage of metabolomics data is often the availability, awareness, and usability of analysis tools. Software tools specifically designed for metabolomics data are being developed at an increasing rate, with hundreds of ...
Jonathan Dekermanjian +3 more
doaj +1 more source
A Dataflow Language for Decentralised Orchestration of Web Service Workflows [PDF]
Orchestrating centralised service-oriented workflows presents significant scalability challenges that include: the consumption of network bandwidth, degradation of performance, and single points of failure.
Barker, Adam +2 more
core +1 more source
Majorbio Cloud 2024: Update single‐cell and multiomics workflows
Majorbio Cloud (https://cloud.majorbio.com/) is a one‐stop online analytic platform aiming at promoting the development of bioinformatics services, narrowing the gap between wet and dry experiments, and accelerating the discoveries for the life sciences ...
Chang Han +11 more
semanticscholar +1 more source
Cirrus: a Serverless Framework for End-to-end ML Workflows
Machine learning (ML) workflows are extremely complex. The typical workflow consists of distinct stages of user interaction, such as preprocessing, training, and tuning, that are repeatedly executed by users but have heterogeneous computational ...
J. Carreira +4 more
semanticscholar +1 more source

