Results 51 to 60 of about 997 (148)

Rare Earth Elements Alter Redox Balance in Methylomicrobium alcaliphilum 20ZR

Frontiers in Microbiology, 2018
Background: Rare Earth Elements (REEs) control methanol utilization in both methane- and methanol-utilizing microbes. It has been established that the addition of REEs leads to the transcriptional repression of MxaFI-MeDH [a two-subunit methanol ...
Ilya R. Akberdin, Ilya R. Akberdin, Ilya R. Akberdin, David A. Collins, Richard Hamilton, Dmitry Y. Oshchepkov, Anil K. Shukla, Carrie D. Nicora, Ernesto S. Nakayasu, Joshua N. Adkins, Marina G. Kalyuzhnaya   +10 more
doaj   +1 more source

Lanthanide transport, storage, and beyond: genes and processes contributing to XoxF function in Methylorubrum extorquens AM1

bioRxiv, 2019
Lanthanides are elements that have been recently recognized as “new life metals” in bacterial metabolism, yet much remains unknown regarding lanthanide acquisition, regulation, and use.
Paula Roszczenko-Jasińska, Huong N. Vu, Gabriel A. Subuyuj, Ralph Valentine Crisostomo, James Cai, Charumathi Raghuraman, Elena M. Ayala, Erik J. Clippard, Nicholas F. Lien, Richard T. Ngo, Fauna Yarza, Caitlin A. Hoeber, N. C. Martinez-Gomez, E. Skovran   +13 more
semanticscholar   +1 more source

Draft genome sequence of Methyloferula stellata AR4, an obligate methanotroph possessing only a soluble methane monooxygenase [PDF]

, 2015
Methyloferula stellata AR4 is an aerobic acidophilic methanotroph, which, in contrast to most known methanotrophs but similar to Methylocella spp., possesses only a soluble methane monooxygenase. However, it differs from Methylocella spp.
Crombie, Andrew T., Dedysh, Svetlana N., Dunfield, Peter F., Kalyuzhnaya, Marina G., Kyrpides, Nikos, Murrell, J. Colin, Naumoff, Daniil G., Shapiro, Nicole, Smirnova, Angela V., Vorobev, Alexey V., Woyke, Tanja   +10 more
core   +2 more sources

Draft genome sequences of gammaproteobacterial methanotrophs isolated from marine ecosystems [PDF]

, 2016
The genome sequences of Methylobacter marinus A45, Methylobacter sp. strain BBA5.1, and Methylomarinum vadi IT-4 were obtained.
Bringel, Françoise, Dispirito, Alan A., Dunfield, Peter F., Flynn, James D., Hirayama, Hisako, Jetten, Mike S. M., Kalyuzhnaya, Marina G., Khmelenina, Valentina N., Klotz, Martin G., Knief, Claudia, Kyrpides, Nikos, Murrell, J. Colin, Op Den Camp, Huub J. M., Sakai, Yasuyoshi, Semrau, Jeremy D., Shapiro, Nicole, Stein, Lisa Y., Svenning, Mette M., Trotsenko, Yuri A., Vuilleumier, Stéphane, Woyke, Tanja   +20 more
core   +4 more sources

A comparative transcriptome analysis of the novel obligate methanotroph Methylomonas sp. DH-1 reveals key differences in transcriptional responses in C1 and secondary metabolite pathways during growth on methane and methanol [PDF]

, 2019
Background: Methanotrophs play an important role in biotechnological applications, with their ability to utilize single carbon (C1) feedstock such as methane and methanol to produce a range of high-value compounds.
Anh Duc Nguyen, Kim, Donghyuk, Lee, Eun Yeol   +2 more
core   +9 more sources

Draft genome of a novel methanotrophic Methylobacter sp. from the volcanic soils of Pantelleria Island [PDF]

, 2021
The genus Methylobacter is considered an important and often dominant group of aerobic methane-oxidizing bacteria in many oxic ecosystems, where members of this genus contribute to the reduction of CH4 emissions.
D'Alessandro W., Frank J., Gagliano A. L., Hogendoorn C., Jetten M. S. M., Op den Camp H. J. M., Picone N., Poghosyan L., Pol A., Quatrini P., van Alen T. A., van Hout F., Vijverberg S.   +12 more
core   +1 more source

Genome-resolved metagenomics identifies novel active microbes in biogeochemical cycling within methanol-enriched soil. [PDF]

Environ Microbiol Rep
Ensemble binning of environmental metagenomes significantly improves the analysis of complex datasets. A re‐analysis of metagenomes, derived from labelled DNA extracted from 13C methanol‐enriched rhizosphere soils, yielded a substantial number of metagenome‐assembled genomes.
Macey MC.
europepmc   +2 more sources

Uptake and effect of rare earth elements on gene expression in Methylosinus trichosporium OB3b [PDF]

, 2016
It is well known that Methylosinus trichosporium OB3b has two forms of methane monooxygenase (MMO) responsible for the initial conversion of methane to methanol, a cytoplasmic (soluble) methane monooxygenase and a membrane-associated (particulate ...
DiSpirito, Alan A, Farhan Ul Haque, Muhammad, Gu, Wenyu, Semrau, Jeremy D   +3 more
core   +1 more source

Lanthanide‐Controlled Protein Switches: Development and In Vitro and In Vivo Applications

Angewandte Chemie, Volume 137, Issue 9, February 24, 2025.
Engineering artificial allosteric protein switches controlled by rare earth elements allows the development of assays, construction of bioelectronic devices, and REE‐controlled microorganisms. Abstract Lanthanides, which are part of the rare earth elements group have numerous applications in electronics, medicine and energy storage.
Zhong Guo, Oleh Smutok, Chantal Ronacher, Raquel Aguiar Rocha, Patricia Walden, Sergey Mureev, Zhenling Cui, Evgeny Katz, Colin Scott, Kirill Alexandrov   +9 more
wiley   +2 more sources

Mononuclear binding and catalytic activity of europium(III) and gadolinium(III) at the active site of the model metalloenzyme phosphotriesterase. [PDF]

Acta Crystallogr D Struct Biol
The crystal structures of europium(III)‐ and gadolinium(III)‐bound phosphotriesterase are presented along with esterase activity data for the lanthanide‐bound enzymes.Lanthanide ions have ideal chemical properties for catalysis, such as hard Lewis acidity, fast ligand‐exchange kinetics, high coordination‐number preferences and low geometric ...
Breeze CW, Nakano Y, Campbell EC, Frkic RL, Lupton DW, Jackson CJ.   +5 more
europepmc   +2 more sources