16S-ITGDB: An Integrated Database for Improving Species Classification of Prokaryotic 16S Ribosomal RNA Sequences [PDF]
Frontiers in Bioinformatics, 2022 Analyzing 16S ribosomal RNA (rRNA) sequences allows researchers to elucidate the prokaryotic composition of an environment. In recent years, third-generation sequencing technology has provided opportunities for researchers to perform full-length sequence
Yu-Peng Hsieh +9 more
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Choice of 16S Ribosomal RNA Primers Impacts Male Urinary Microbiota Profiling [PDF]
Frontiers in Cellular and Infection Microbiology, 2022 Accessibility to next-generation sequencing (NGS) technologies has enabled the profiling of microbial communities living in distinct habitats. 16S ribosomal RNA (rRNA) gene sequencing is widely used for microbiota profiling with NGS technologies.
Vitor Heidrich +9 more
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Choice of 16S ribosomal RNA primers affects the microbiome analysis in chicken ceca [PDF]
Scientific Reports, 2021 We evaluated the effect of applying different sets of 16S rRNA primers on bacterial composition, diversity, and predicted function in chicken ceca. Cecal contents from Ross 708 birds at 1, 3, and 5Â weeks of age were collected for DNA isolation.
Nadia Darwish +3 more
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Comparison of 16S ribosomal RNA hypervariable regions in microbiome studies of anorexia nervosa [PDF]
Frontiers in MicrobiologyIntroductionShort read sequencing of the 16S ribosomal RNA (rRNA) gene targeting specific hypervariable regions is widely employed to study the human gut microbiota.
Arunabh Sharma +10 more
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A systematic algorithm using 16S ribosomal RNA for accurate diagnosis of pneumonia pathogens [PDF]
Scientific ReportsOver half of community-acquired pneumonia cases are caused by a few dozen bacterial species, and accurate identification of these pathogens is essential for effective treatment. In this study, we developed a reliable diagnostic method using 16S ribosomal
Ferry Dwi Kurniawan +5 more
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Therapeutic intervention based on gene sequencing analysis of microbial 16S ribosomal RNA of the intrauterine microbiome improves pregnancy outcomes in IVF patients: a prospective cohort study. [PDF]
J Assist Reprod Genet, 2023 Iwami N +7 more
europepmc +3 more sources
The clinical impact of 16S ribosomal RNA PCR and sequencing in the identification of bacterial infections: a 7-year report from a Lebanese tertiary care center. [PDF]
Front Cell Infect MicrobiolYoussef N +14 more
europepmc +3 more sources
Successful identification of Granulicatella adiacens in postoperative acute infectious endophthalmitis using a bacterial 16S ribosomal RNA gene-sequencing platform with MinION™: A case report. [PDF]
Am J Ophthalmol Case Rep, 2022 Ishino M +7 more
europepmc +2 more sources
Clinical usefulness of 16S ribosomal RNA real-time PCR for the diagnosis of scrub typhus. [PDF]
Sci Rep, 2021 Yun NR, Kim CM, Kim DY, Seo JW, Kim DM.
europepmc +3 more sources
A large scale 16S ribosomal RNA gene amplicon dataset of hand, foot and mouth patients and healthy individuals. [PDF]
Sci Data, 2023 Guo X +7 more
europepmc +2 more sources