Results 11 to 20 of about 1,076,866 (305)
Primer and platform effects on 16S rRNA tag sequencing [PDF]
Frontiers in Microbiology, 2015 Sequencing of 16S rRNA gene tags is a popular method for profiling and comparing microbial communities. The protocols and methods used, however, vary considerably with regard to amplification primers, sequencing primers, sequencing technologies; as well ...
Julien eTremblay +10 more
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F1000Research, 2023 Background: Microscopic, biochemical, molecular, and computer-based approaches are extensively used to identify and classify bacterial populations.
Bobby Paul
doaj +3 more sources
16S rRNA sequencing analysis: the devil is in the details [PDF]
Gut Microbes, 2020 User-friendly computational tools for 16S ribosomal RNA (rRNA) sequencing analysis enable researchers who are not bioinformaticians to analyze and interpret sequencing data from microbial communities. These tools' easy-to-use interfaces belie the sophisticated and rapidly-evolving science of their underlying algorithms.
Amy M. Tsou +3 more
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Mitochondrial 16S rRNA Sequence Diversity of Hominoids [PDF]
Journal of Heredity, 2001 We determined nucleotide sequences of the 16S rRNA gene of mitochondrial DNA (mtDNA) (about 1.6 kb) for 35 chimpanzee, 13 bonobo, 10 gorilla, 16 orangutan, and 23 gibbon individuals. We compared those data with published sequences and estimated nucleotide diversity for each species. All the ape species showed higher diversity than human.
R, Noda +8 more
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Comparison of 16S rRNA gene sequences of genus Methanobrevibacter [PDF]
BMC Microbiology, 2004 The phylogeny of the genus Methanobrevibacter was established almost 25 years ago on the basis of the similarities of the 16S rRNA oligonucleotide catalogs. Since then, many 16S rRNA gene sequences of newly isolated strains or clones representing the genus Methanobrevibacter have been deposited.
Patole Milind S +6 more
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Variable Region Sequences Influence 16S rRNA Performance
Microbiology Spectrum, 2023 This study reevaluates the notion that 16S rRNA gene variable region sequences are uninformative for intra-genus classification and that single nucleotide variations within them have no consequence to strains that bear them. We demonstrated that the performance of 16S rRNAs in Escherichia coli
Nikhil Bose, Sean D. Moore
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16S rRNA (V3-V4 region) sequencing data
, 2019 Sequencing data of bacterial 16S rRNA (V3-V4 region) in colonic faeces of mice fed with high-fat diet for 16 ...
Jinghua Peng (7440470)
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Microbiology Spectrum, 2021 Because some organisms causing urinary tract infection (UTI) may be difficult to culture, examination of bacterial gene sequences in the urine may provide a more accurate view of bacteria present during a UTI.
Christopher W. Marshall +5 more
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