Results 161 to 170 of about 860,088 (184)

Targeted amplicon sequencing for enhanced detection of spiked Shiga toxin-producing <i>Escherichia coli</i> in ready-to-eat romaine lettuce: a proof-of-concept study. [PDF]

Microbiol Spectr
Patel I, Mammel M, Gangiredla J, Mukherjee A.   +3 more
europepmc   +1 more source

Comparative 16S rRNA Gene Amplicon Sequencing of the Fecal Microbiome in Pet Dogs and Cats of Different Breeds in Dhaka City, Bangladesh: With Preliminary Insights Into Zoonotic Relevance. [PDF]

Int J Microbiol
Tania MNT, Sabrin MS, Mannan MA, Islam MM, Hossain MT, Rahman MH, Islam MR, Sultana S, Hossain MS, Islam M.   +9 more
europepmc   +1 more source

Gut and fecal microbiome profiles of the electric eel (<i>Electrophorus varii</i>) revealed by 16S rRNA amplicon sequencing. [PDF]

Data Brief
Hong J, Song H, Jeong S, Kim JS, Choi H, Kim C.   +5 more
europepmc   +1 more source

Amplicon-based sequencing of viral genomes

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Rapid bacterial community profiling of equine faecal, skin, milk and saliva samples using Oxford Nanopore long-read 16S rRNA amplicon sequencing. [PDF]

J Med Microbiol
Leng J, Tait C, Alsubaie B, Van Vliet AHM, Sells P, La Ragione RM, Proudman C.   +6 more
europepmc   +1 more source

Target gene mutation discovery and amplicon sequencing for evaluating maduramicin resistance in Eimeria tenella. [PDF]

Commun Biol
Gao Y, Li X, Yuan MD, Guo Q, Zhang S, Wang Z, Xie Y, Han H, Liu X, Zhang Y, Suo X.   +10 more
europepmc   +1 more source

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Amplicon Sequencing Pipelines in Metagenomics

2023
Taxonomic profiling among a large number of samples is a fundamental task during amplicon sequencing analysis. The heterogeneity and technical noises in the sample handling, library preparation, and sequencing present a major challenge to how the biological conclusions are drawn from the data analysis, and accordingly, many tools have been developed to
openaire   +2 more sources

Amplicon sequence data of locust

2022
Changes of microbial community in migratory locusts after Beauveria bassiana infection.
openaire   +1 more source

Practical innovations for high-throughput amplicon sequencing

Nature Methods, 2013
We describe improvements for sequencing 16S ribosomal RNA (rRNA) amplicons, a cornerstone technique in metagenomics. Through unique tagging of template molecules before PCR, amplicon sequences can be mapped to their original templates to correct amplification bias and sequencing error with software we provide.
Derek S, Lundberg, Scott, Yourstone, Piotr, Mieczkowski, Corbin D, Jones, Jeffery L, Dangl   +4 more
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