Results 31 to 40 of about 77,666 (195)

Classification of scale-free networks [PDF]

open access: yesProc. Natl. Acad. Sci. USA 99, 12583 (2002), 2002
While the emergence of a power law degree distribution in complex networks is intriguing, the degree exponent is not universal. Here we show that the betweenness centrality displays a power-law distribution with an exponent \eta which is robust and use it to classify the scale-free networks. We have observed two universality classes with \eta \approx 2.
arxiv   +1 more source

Cyclic nucleotides in archaea: Cyclic di‐AMP in the archaeon Haloferax volcanii and its putative role

open access: yesMicrobiologyOpen, 2019
The role of cyclic nucleotides as second messengers for intracellular signal transduction has been well described in bacteria. One recently discovered bacterial second messenger is cyclic di‐adenylate monophosphate (c‐di‐AMP), which has been demonstrated
Frank Braun   +6 more
doaj   +1 more source

Lipidomic chemotaxonomy aligned with phylogeny of Halobacteria

open access: yesFrontiers in Microbiology, 2023
Archaea play an important role in global biogeochemical cycles and are considered ancestral to eukaryotes. The unique lipid composition of archaea, characterized by isoprenoid alkyl chains and ether linkage to glycerol-1-phosphate, offers valuable ...
Wenyong Yao   +11 more
doaj   +1 more source

Identification of XylR, the Activator of Arabinose/Xylose Inducible Regulon in Sulfolobus acidocaldarius and Its Application for Homologous Protein Expression

open access: yesFrontiers in Microbiology, 2020
The thermophilic archaeon Sulfolobus acidocaldarius can use different carbon sources for growth, including the pentoses D-xylose and L-arabinose. In this study, we identified the activator XylR (saci_2116) responsible for the transcriptional regulation ...
Nienke van der Kolk   +7 more
doaj   +1 more source

“Influence of plasmids, selection markers and auxotrophic mutations on Haloferax volcanii cell shape plasticity”

open access: yesFrontiers in Microbiology, 2023
Haloferax volcanii and other Haloarchaea can be pleomorphic, adopting different shapes, which vary with growth stages. Several studies have shown that H.
Megha Patro   +4 more
doaj   +1 more source

"Probing the limits of extremophilic life in extraterrestrial environment-simulated experiments" [PDF]

open access: yes, 2012
The results obtained in these experiments have revealed a remarkable resistance of extremophilic bacteria and archaea against different radiation sources (VUV, solar wind simulants, X rays) whenever protected by microsized carbonaceus grains. Altogether, the collected data suggest the interesting possibility of the existence of microbial life beyond ...
arxiv   +1 more source

Electron cryo-microscopy reveals the structure of the archaeal thread filament

open access: yesNature Communications, 2022
Pili are filamentous appendages on the surface of bacteria and archaea, and play roles in multiple processes such as adhesion, motility and horizontal gene transfer. Here, Gaines et al. describe the structure of a new type of pilus, termed ‘thread’, from
Matthew C. Gaines   +10 more
doaj   +1 more source

Length, Protein-Protein Interactions, and Complexity [PDF]

open access: yes, 2004
The evolutionary reason for the increase in gene length from archaea to prokaryotes to eukaryotes observed in large scale genome sequencing efforts has been unclear. We propose here that the increasing complexity of protein-protein interactions has driven the selection of longer proteins, as longer proteins are more able to distinguish among a larger ...
arxiv   +1 more source

Physical Model of the Immune Response of Bacteria Against Bacteriophage Through the Adaptive CRISPR-Cas Immune System [PDF]

open access: yesPhys. Biol. 10 (2013) 025004, 2014
Bacteria and archaea have evolved an adaptive, heritable immune system that recognizes and protects against viruses or plasmids. This system, known as the CRISPR-Cas system, allows the host to recognize and incorporate short foreign DNA or RNA sequences, called `spacers' into its CRISPR system.
arxiv   +1 more source

Ammonia Oxidation by the Arctic Terrestrial Thaumarchaeote Candidatus Nitrosocosmicus arcticus Is Stimulated by Increasing Temperatures

open access: yesFrontiers in Microbiology, 2019
Climate change is causing arctic regions to warm disproportionally faster than those at lower latitudes, leading to alterations in carbon and nitrogen cycling, and potentially higher greenhouse gas emissions.
Ricardo J. Eloy Alves   +9 more
doaj   +1 more source

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