Results 271 to 280 of about 176,761 (289)

ATAC-seq and RNA-seq of Eucalyptus

ATAC-seq and RNA-seq of Eucalyptus under cold ...
openaire   +1 more source

A Biophysical Model for ATAC-seq Data Analysis

ABSTRACT The Assay for Transposase-Accessible Chromatin using sequencing (ATAC-seq) can be used to identify open chromatin regions, providing complementary information to RNA-seq which measures gene expression by sequencing. Single-cell “multiome” methods offer the possibility of measuring both modalities simultaneously in cells ...
Catherine Felce, Gennady Gorin, Lior Pachter   +2 more
openaire   +1 more source

txci-ATAC-seq

2023
openaire   +1 more source

Normalization benchmark of ATAC-seq datasets shows the importance of accounting for GC-content effects

Cell Reports Methods, 2022
Kelly Street, Davide Risso, John Ngai
exaly  

DeNOPA: decoding nucleosome positions sensitively with sparse ATAC-seq data.

Briefings in Bioinformatics, 2022
Bingxiang Xu, Zhihua Zhang
exaly  

Integrating ATAC-seq and RNA-seq Reveals the Dynamics of Chromatin Accessibility and Gene Expression in Apple Response to Drought

International Journal of Molecular Sciences, 2022
Jidi Xu, Fengwang Ma, Jieqiang He
exaly  

ATAC-DEA: A Web-Based ATAC-Seq Data Differential Peak and Annotation Analysis Application

Journal of Computational Biology, 2023
Sufang Wang
exaly  

Integration of ATAC-Seq and RNA-Seq Identifies Key Genes in Light-Induced Primordia Formation of Sparassis latifolia

International Journal of Molecular Sciences, 2020
Donglai Xiao, Chi Yang, Lu Ma
exaly  

People also looked at

Frontiers in Medicine, 2020
Guo-Dong Sun, Xianwen Zhang, Zhenhua Song   +2 more
exaly  

ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide

Current Protocols in Molecular Biology, 2015
Jason D. Buenrostro, Howard Y. Chang, William Greenleaf   +2 more
exaly