Results 11 to 20 of about 31,871,362 (365)
Unzipping of DNA with correlated base sequence [PDF]
Physical Review E, 2004 We consider force-induced unzipping transition for a heterogeneous DNA model with a correlated base-sequence. Both finite-range and long-range correlated situations are considered. It is shown that finite-range correlations increase stability of DNA with respect to the external unzipping force. Due to long-range correlations the number of unzipped base-
Ming-Chya Wu +4 more
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Base-sequence-dependent sliding of proteins on DNA. [PDF]
Physical review. E, Statistical, nonlinear, and soft matter physics, 2004 The possibility that the sliding motion of proteins on DNA is influenced by the base sequence through a base pair reading interaction, is considered.
M. Barbi +3 more
semanticscholar +6 more sources
Kernel based Dirichlet sequences
Bernoulli, 2023 Let $X=(X_1,X_2,\ldots)$ be a sequence of random variables with values in a standard space $(S,\mathcal{B})$. Suppose \begin{gather*} X_1\simν\quad\text{and}\quad P\bigl(X_{n+1}\in\cdot\mid X_1,\ldots,X_n\bigr)=\frac{θν(\cdot)+\sum_{i=1}^nK(X_i)(\cdot)}{n+θ}\quad\quad\text{a.s.} \end{gather*} where $θ>0$ is a constant, $ν$ a probability measure on $\
Berti Patrizia +4 more
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TRAPR: R Package for Statistical Analysis and Visualization of RNA-Seq Data [PDF]
Genomics & Informatics, 2017 High-throughput transcriptome sequencing, also known as RNA sequencing (RNA-Seq), is a standard technology for measuring gene expression with unprecedented accuracy.
Jae Hyun Lim, Soo Youn Lee, Ju Han Kim
doaj +1 more source
ProphetNet: Predicting Future N-gram for Sequence-to-Sequence Pre-training [PDF]
Findings, 2020 This paper presents a new sequence-to-sequence pre-training model called ProphetNet, which introduces a novel self-supervised objective named future n-gram prediction and the proposed n-stream self-attention mechanism.
Yu Yan +7 more
semanticscholar +1 more source
Sequence-Based Anytime Control [PDF]
IEEE Transactions on Automatic Control, 2013 We present two related anytime algorithms for control of nonlinear systems when the processing resources available are time-varying. The basic idea is to calculate tentative control input sequences for as many time steps into the future as allowed by the available processing resources at every time step.
Quevedo, Daniel E., Gupta, Vijay
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Reference-Based Sequence Classification [PDF]
IEEE Access, 2020 Sequence classification is an important data mining task in many real world applications. Over the past few decades, many sequence classification methods have been proposed from different aspects. In particular, the pattern-based method is one of the most important and widely studied sequence classification methods in the literature.
Zengyou He +4 more
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Sequence dependence of transient Hoogsteen base pairing in DNA.
PLoS Computational Biology, 2022 Hoogsteen (HG) base pairing is characterized by a 180° rotation of the purine base with respect to the Watson-Crick-Franklin (WCF) motif. Recently, it has been found that both conformations coexist in a dynamical equilibrium and that several biological ...
Alberto Pérez de Alba Ortíz +2 more
doaj +1 more source
IEEE Access, 2021 Mobile manipulators are able to operate in a large workspace, and have the potential to replace human workers to perform a sequence of pick-and-place tasks at separate locations. Many existing works optimize the base position or manipulator configuration
Jingren Xu +4 more
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The Web as a Knowledge-Base for Answering Complex Questions [PDF]
North American Chapter of the Association for Computational Linguistics, 2018 Answering complex questions is a time-consuming activity for humans that requires reasoning and integration of information. Recent work on reading comprehension made headway in answering simple questions, but tackling complex questions is still an ...
Alon Talmor, Jonathan Berant
semanticscholar +1 more source