Results 11 to 20 of about 905,353 (315)
Base Sequence Context Effects on Nucleotide Excision Repair [PDF]
Journal of Nucleic Acids, 2010 Nucleotide excision repair (NER) plays a critical role in maintaining the integrity of the genome when damaged by bulky DNA lesions, since inefficient repair can cause mutations and human diseases notably cancer. The structural properties of DNA lesions
Yuqin Cai +3 more
doaj +2 more sources
Resolution sequence stratigraphic division of the Da2 member in the Yanji Basin based on INPEFA and Milankovitch cycles [PDF]
Scientific ReportsThe Dalazi Formation in the Yanji Basin is primarily composed of fan delta and lacustrine facies, with local development of alluvial fan deposits. The second member of the Dalazi Formation (Da₂) serves as the key oil-bearing interval for exploration and ...
Cunlei Li +6 more
doaj +2 more sources
Reservoir prediction of shallow braided delta front by Comprehensive Prediction Error Filtering Analysis [PDF]
E3S Web of Conferences, 2021 For a more accurate reservoir prediction of braided delta front, the method of High Resolution Sequence Stratigraphy was adopted in Moxizhuang Oil Field with the assistance of Comprehensive Prediction Error Filter Analysis.
Li Wenjuan
doaj +1 more source
TRAPR: R Package for Statistical Analysis and Visualization of RNA-Seq Data [PDF]
Genomics & Informatics, 2017 High-throughput transcriptome sequencing, also known as RNA sequencing (RNA-Seq), is a standard technology for measuring gene expression with unprecedented accuracy.
Jae Hyun Lim, Soo Youn Lee, Ju Han Kim
doaj +1 more source
Hierarchical Phrase-Based Sequence-to-Sequence Learning
Proceedings of the 2022 Conference on Empirical Methods in Natural Language Processing, 2022 We describe a neural transducer that maintains the flexibility of standard sequence-to-sequence (seq2seq) models while incorporating hierarchical phrases as a source of inductive bias during training and as explicit constraints during inference. Our approach trains two models: a discriminative parser based on a bracketing transduction grammar whose ...
Wang, Bailin +3 more
openaire +2 more sources
Sequence-Based Linkage Analysis [PDF]
The American Journal of Human Genetics, 2004 The rapid decrease in the cost of DNA sequencing will enable its use for novel applications. Here, we investigate the use of DNA sequencing for simultaneous discovery and genotyping of polymorphisms in family linkage studies. In the proposed approach, short contiguous segments of genomic DNA, regularly spaced across the genome, are resequenced in each ...
Furman, Itay +6 more
openaire +2 more sources
Appell Bases on Sequence Spaces [PDF]
Journal of Nonlinear Mathematical Physics, 2021 zbMATH Open Web Interface contents unavailable due to conflicting licenses.
Maldonado, M. +2 more
openaire +2 more sources
Contact-based sequence alignment [PDF]
Nucleic Acids Research, 2004 This paper introduces the novel method of contact-based protein sequence alignment, where structural information in the form of contact mutation probabilities is incorporated into an alignment routine using contact-mutation matrices (CAO: Contact Accepted mutatiOn).
Kleinjung, J. +3 more
openaire +3 more sources
Sequence dependence of transient Hoogsteen base pairing in DNA.
PLoS Computational Biology, 2022 Hoogsteen (HG) base pairing is characterized by a 180° rotation of the purine base with respect to the Watson-Crick-Franklin (WCF) motif. Recently, it has been found that both conformations coexist in a dynamical equilibrium and that several biological ...
Alberto Pérez de Alba Ortíz +2 more
doaj +1 more source
IEEE Access, 2021 Mobile manipulators are able to operate in a large workspace, and have the potential to replace human workers to perform a sequence of pick-and-place tasks at separate locations. Many existing works optimize the base position or manipulator configuration
Jingren Xu +4 more
doaj +1 more source