Results 31 to 40 of about 2,954,117 (341)

Base-By-Base Version 3: New Comparative Tools for Large Virus Genomes

open access: yesViruses, 2018
Base-By-Base is a comprehensive tool for the creation and editing of multiple sequence alignments that is coded in Java and runs on multiple platforms. It can be used with gene and protein sequences as well as with large viral genomes, which themselves ...
Shin-Lin Tu   +5 more
doaj   +1 more source

Effect of Base Sequence on G-Wire Formation in Solution

open access: yesJournal of Nucleic Acids, 2010
The formation and dimensions of G-wires by different short G-rich DNA sequences in solution were investigated by dynamic light scattering (DLS) and polyacrilamide gel electrophoresis (PAGE).
Lea Spindler   +4 more
doaj   +1 more source

Peak Height Pattern in Dichloro-Rhodamine and Energy Transfer Dye Terminator Sequencing

open access: yesBioTechniques, 1998
Establishing the pattern in peak heights within local sequence contexts improves the accuracy of base calling and the identification of DNA sequence variations in dye-terminator cycle sequencing.
H. Zakeri   +4 more
doaj   +1 more source

Theory of phase segregation in DNA assemblies containing two different base pair sequence types [PDF]

open access: yes, 2016
Spontaneous pairing of homologous DNA sequences – a challenging subject in molecular biophysics, often referred to as ‘homology recognition’ – ha s been observed in vitro for several DNA system s a . One of th e se experiments involved liquid crystalline
Kornyshev, AA, Lee, DJ, Wynveen, A
core   +1 more source

Phenotypic and Molecular Characterization of Multidrug-Resistant Clinical Isolates of the Candidozyma haemuli Species Complex (Formerly Candida haemulonii Species Complex) from the Brazilian Amazon Reveals the First Case of Candidozyma pseudohaemuli in Brazil

open access: yesJournal of Fungi
This study included 24 isolates of the Candidozyma haemuli species complex from patients in the Brazilian Amazon between 2021 and 2024. These isolates were identified by sequencing as C. duobushaemuli (54.2%), C. haemuli sensu stricto (29.2%), C. haemuli
Sérgio Lobato França   +7 more
doaj   +1 more source

A Comparison of a Transition-based and a Sequence-based Analysis of AOI Transition Sequences [PDF]

open access: yesACM Symposium on Eye Tracking Research and Applications, 2020
Several visual analytics (VA) systems are used for analyzing eye-tracking data because they synergize human-in-the-loop exploration with speed and accuracy of the computer. In the VA systems, the choices of visualization techniques could afford discovering certain types of insights while hindering others.
Yang, Chia-Kai   +2 more
openaire   +2 more sources

TurboFold: Iterative probabilistic estimation of secondary structures for multiple RNA sequences

open access: yesBMC Bioinformatics, 2011
Background The prediction of secondary structure, i.e. the set of canonical base pairs between nucleotides, is a first step in developing an understanding of the function of an RNA sequence.
Sharma Gaurav   +2 more
doaj   +1 more source

SNP Discrimination by Tolane-Modified Peptide Nucleic Acids: Application for the Detection of Drug Resistance in Pathogens

open access: yesMolecules, 2020
During the treatment of viral or bacterial infections, it is important to evaluate any resistance to the therapeutic agents used. An amino acid substitution arising from a single base mutation in a particular gene often causes drug resistance in ...
Kenji Takagi   +8 more
doaj   +1 more source

Combinatorial RNA Design Designability and Structure-Approximating Algorithm in Watson-Crick and Nussinov-Jacobson Energy Models [PDF]

open access: yes, 2016
We consider the Combinatorial RNA Design problem, a minimal instance of RNA design where one must produce an RNA sequence that adopts a given secondary structure as its minimal free-energy structure.
Haleš, Jozef   +4 more
core   +5 more sources

Study of Influence of Laser Cutting Sequence upon Thermal Deformation of a Base Sheet

open access: yesJournal of Advanced Mechanical Design, Systems, and Manufacturing, 2007
In case that a lot of products were cut out from a wide base sheet by laser cutting, the sheet had been much deformed so that the error occurred in a height regulator. This paper deals with thermal deformation of a base sheet caused by laser cutting.
Masayuki NUNOBIKI   +2 more
doaj   +1 more source

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