Results 31 to 40 of about 842,010 (246)
On the base sequence conjecture
Discrete Mathematics, 2010 Let BS(m,n) denote the set of base sequences (A;B;C;D), with A and B of length m and C and D of length n. The base sequence conjecture (BSC) asserts that BS(n+1,n) exist (i.e., are non-empty) for all n. This is known to be true for n <= 36 and when n is a Golay number. We show that it is also true for n=37 and n=38. It is worth pointing out that BSC
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TurboFold: Iterative probabilistic estimation of secondary structures for multiple RNA sequences
BMC Bioinformatics, 2011 Background The prediction of secondary structure, i.e. the set of canonical base pairs between nucleotides, is a first step in developing an understanding of the function of an RNA sequence.
Sharma Gaurav +2 more
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Molecules, 2020 During the treatment of viral or bacterial infections, it is important to evaluate any resistance to the therapeutic agents used. An amino acid substitution arising from a single base mutation in a particular gene often causes drug resistance in ...
Kenji Takagi +8 more
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Unzipping of DNA with correlated base sequence [PDF]
Physical Review E, 2004 We consider force-induced unzipping transition for a heterogeneous DNA model with a correlated base-sequence. Both finite-range and long-range correlated situations are considered. It is shown that finite-range correlations increase stability of DNA with respect to the external unzipping force. Due to long-range correlations the number of unzipped base-
Ming-Chya Wu +4 more
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Study of Influence of Laser Cutting Sequence upon Thermal Deformation of a Base Sheet
Journal of Advanced Mechanical Design, Systems, and Manufacturing, 2007 In case that a lot of products were cut out from a wide base sheet by laser cutting, the sheet had been much deformed so that the error occurred in a height regulator. This paper deals with thermal deformation of a base sheet caused by laser cutting.
Masayuki NUNOBIKI +2 more
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Sequence-based abstract interpretation of Prolog [PDF]
Theory and Practice of Logic Programming, 2001 Abstract interpretation is a general methodology for systematic development of program analyses. An abstract interpretation framework is centered around a parametrized non-standard semantics that can be instantiated by various domains to approximate different program properties.
LE CHARLIER B +2 more
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Chloroplast genome variation in upland and lowland switchgrass. [PDF]
PLoS ONE, 2011 Switchgrass (Panicum virgatum L.) exists at multiple ploidies and two phenotypically distinct ecotypes. To facilitate interploidal comparisons and to understand the extent of sequence variation within existing breeding pools, two complete switchgrass ...
Hugh A Young +3 more
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occumb: An R package for site occupancy modeling of eDNA metabarcoding data
Population Ecology, EarlyView.This study introduces a new R package, occumb, for the convenient application of site occupancy modeling using environmental DNA (eDNA) metabarcoding data. We outline a data analysis workflow, including data setup, model fitting, model assessment, and comparison of potential study settings based on model predictions, all of which can be performed using
Keiichi Fukaya, Yuta Hasebe
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Random Shuffling Permutations of Nucleotides [PDF]
Journal of Systemics, Cybernetics and Informatics, 2003 In this paper, we discuss a shuffling sequence problem: Given a DNA sequence, we generate a random sequence that preserves the frequencies of all mononucleotides, dinucleotides, trinucleotides or some high order base-compositions of the given sequence ...
Shiquan Wu, Xun Gu
doaj
FoxO1 signaling in B cell malignancies and its therapeutic targeting
FEBS Letters, EarlyView.FoxO1 has context‐specific tumor suppressor or oncogenic character in myeloid and B cell malignancies. This includes tumor‐promoting properties such as stemness maintenance and DNA damage tolerance in acute leukemias, or regulation of cell proliferation and survival, or migration in mature B cell malignancies.
Krystof Hlavac +3 more
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