Results 61 to 70 of about 2,499 (218)
Current status of the multinational Arabidopsis community
Plant Direct, Volume 4, Issue 7, July 2020., 2020 Abstract The multinational Arabidopsis research community is highly collaborative and over the past thirty years these activities have been documented by the Multinational Arabidopsis Steering Committee (MASC). Here, we (a) highlight recent research advances made with the reference plant Arabidopsis thaliana; (b) provide summaries from recent reports ...
Geraint Parry +136 more
wiley +1 more source
Shared resources, shared costs—leveraging biocuration resources [PDF]
Database, 2015 The manual curation of the information in biomedical resources is an expensive task. This article argues the value of this approach in comparison with other apparently less costly options, such as automated annotation or text-mining, then discusses ways in which databases can make cost savings by sharing infrastructure and tool development.
Orchard, Sandra, Hermjakob, Henning
openaire +2 more sources
Citizen Science for Mining the Biomedical Literature
Citizen Science: Theory and Practice, 2016 Biomedical literature represents one of the largest and fastest growing collections of unstructured biomedical knowledge. Finding critical information buried in the literature can be challenging. To extract information from free-flowing text, researchers
Ginger Tsueng +4 more
doaj +1 more source
PROTEOMICS – Clinical Applications, Volume 14, Issue 4, July 2020., 2020 Purpose Antimicrobial resistance (AMR), especially multidrug resistance, is one of the most serious global threats facing public health. The authors proof‐of‐concept study assessing the suitability of shotgun proteomics as an additional approach to whole‐genome sequencing (WGS) for detecting AMR determinants.
Chih‐yu Chen +9 more
wiley +1 more source
Text mining for the biocuration workflow [PDF]
Database, 2012 Molecular biology has become heavily dependent on biological knowledge encoded in expert curated biological databases. As the volume of biological literature increases, biocurators need help in keeping up with the literature; (semi-) automated aids for biocuration would seem to be an ideal application for natural language processing and text mining ...
Hirschman, L. +14 more
openaire +3 more sources
Dizeez: an online game for human gene-disease annotation. [PDF]
PLoS ONE, 2013 Structured gene annotations are a foundation upon which many bioinformatics and statistical analyses are built. However the structured annotations available in public databases are a sparse representation of biological knowledge as a whole.
Salvatore Loguercio +2 more
doaj +1 more source
Caenorhabditis elegans phosphatase complexes in UniProtKB and Complex Portal
The FEBS Journal, Volume 287, Issue 13, Page 2664-2684, July 2020., 2020 The UniProt Knowledgebase (UniProtKB) and Complex Portal databases facilitate the understanding of how protein phosphorylation is regulated by providing structural and functional information on phosphatase‐containing macromolecular complexes across a wide range of species.
Hema Bye‐A‐Jee +4 more
wiley +1 more source
Cyberinfrastructure and resources to enable an integrative approach to studying forest trees
Evolutionary Applications, Volume 13, Issue 1, Page 228-241, January 2020., 2020 Abstract Sequencing technologies and bioinformatic approaches are now available to resolve the challenges associated with complex and heterozygous genomes. Increased access to less expensive and more effective instrumentation will contribute to a wealth of high‐quality plant genomes in the next few years. In the meantime, more than 370 tree species are
Jill L. Wegrzyn +5 more
wiley +1 more source
Biocuration at the Saccharomyces genome database [PDF]
genesis, 2015 SummarySaccharomyces Genome Database is an online resource dedicated to managing information about the biology and genetics of the model organism, yeast (Saccharomyces cerevisiae). This information is derived primarily from scientific publications through a process of human curation that involves manual extraction of data and their organization into a ...
Marek S, Skrzypek, Robert S, Nash
openaire +2 more sources
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task [PDF]
, 2013 In many databases, biocuration primarily involves literature curation, which usually involves retrieving relevant articles, extracting information that will translate into annotations and identifying new incoming literature.
Arighi, Cecilia N. +4 more
core +1 more source