Results 31 to 40 of about 141,702 (274)
Boolean modelling in plant biology
Quantitative Plant Biology, 2022 Signalling and genetic networks underlie most biological processes and are often complex, containing many highly connected components. Modelling these networks can provide insight into mechanisms but is challenging given that rate parameters are often ...
Aravind Karanam, Wouter-Jan Rappel
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On Fixable Families of Boolean Networks [PDF]
, 2018 The asynchronous dynamics associated with a Boolean network $f : \{0,1\}^n \to \{0,1\}^n$ is a finite deterministic automaton considered in many applications. The set of states is $\{0,1\}^n$, the alphabet is $[n]$, and the action of letter $i$ on a state $x$ consists in either switching the $i$th component if $f_i(x)\neq x_i$ or doing nothing ...
Maximilien Gadouleau, Adrien Richard
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Sensitivities and block sensitivities of elementary symmetric Boolean functions
Journal of Mathematical Cryptology, 2021 Boolean functions have important applications in molecular regulatory networks, engineering, cryptography, information technology, and computer science. Symmetric Boolean functions have received a lot of attention in several decades.
Zhang Jing, Li Yuan, Adeyeye John O.
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Logical computation with self-assembling electric circuits
PLoS ONE, 2022 Inspired by self-assembled biological growth, the Circuit Tile Assembly Model (cTAM) was developed to provide insights into signal propagation, information processing, and computation in bioelectric networks. The cTAM is an abstract model that produces a
Rojoba Yasmin, Russell Deaton
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Delay Partial Synchronization of Mutual Delay Coupled Boolean Networks
Measurement + Control, 2020 This paper studies the delay partial synchronization for mutual delay-coupled Boolean networks. First, the mutual delay-coupled Boolean network model is presented.
Qiang Wei +3 more
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IEEE/ACM Transactions on Networking, 2018 This paper proposes and investigates a Boolean gossip model as a simplified but non-trivial probabilistic Boolean network. With positive node interactions, in view of standard theories from Markov chains, we prove that the node states asymptotically converge to an agreement at a binary random variable, whose distribution is characterized for large ...
Bo Li 0039 +4 more
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Frontiers in Physiology, 2018 Here we introduce bioLQM, a new Java software toolkit for the conversion, modification, and analysis of Logical Qualitative Models of biological regulatory networks.
Aurélien Naldi
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On Circuit Functionality in Boolean Networks
Bulletin of Mathematical Biology, 2013 It has been proved, for several classes of continuous and discrete dynamical systems, that the presence of a positive (resp. negative) circuit in the interaction graph of a system is a necessary condition for the presence of multiple stable states (resp. a cyclic attractor). A positive (resp.
Comet, Jean-Paul +9 more
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Fundamental Boolean network modelling for childhood acute lymphoblastic leukaemia pathways
Quantitative Biology, 2022 Background A novel data‐driven Boolean model, namely, the fundamental Boolean model (FBM), has been proposed to draw genetic regulatory insights into gene activation, inhibition, and protein decay, published in 2018.
Leshi Chen +2 more
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BMC Bioinformatics, 2017 Background Gene regulatory networks govern the function of key cellular processes, such as control of the cell cycle, response to stress, DNA repair mechanisms, and more.
Levi D. Mcclenny +2 more
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