Results 31 to 40 of about 2,853,210 (289)
On Identification of Boolean Control Networks
SIAM Journal on Control and Optimization, 2022 A new analytical framework consisting of two phenomena, a single sample and multiple samples, is proposed to formulate the identification problem of Boolean control networks (BCNs) systematically and comprehensively. Under this framework, the existing works on identification can be categorized as special cases of these two phenomena.
Biao Wang 0003 +2 more
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Synchronizing Boolean Networks Asynchronously
Journal of Computer and System Sciences, 2022 The asynchronous automaton associated with a Boolean network f:{0,1}n->{0,1}n is the finite deterministic automaton where the set of states is {0,1}n, the alphabet is [n] and the action of letter i on a state x consists in switching the i-th component if fi(x)=xi+1 or doing nothing otherwise.
Julio Aracena +2 more
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Quantum annealing algorithms for Boolean tensor networks
Scientific Reports, 2022 Quantum annealers manufactured by D-Wave Systems, Inc., are computational devices capable of finding high-quality heuristic solutions of NP-hard problems.
Elijah Pelofske +4 more
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Synchronization of Coupled Boolean Networks With Different Update Scheme
IEEE Access, 2020 In this paper, the synchronization of coupled Boolean networks with asynchronous update scheme is investigated. First, the asynchronous Boolean dynamics is transformed into a linear expression with the semi-tensor product technique.
Yujun Niu, Hongjun Liu, Qiang Wei
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Feedback Shaping for Boolean Networks [PDF]
, 2023 Boolean networks, as logical dynamical systems where the system states are Boolean variables, arise from applications in biology, computer networks, and social networks etc.
Valcher, Maria Elena +2 more
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Boolean modelling in plant biology
Quantitative Plant Biology, 2022 Signalling and genetic networks underlie most biological processes and are often complex, containing many highly connected components. Modelling these networks can provide insight into mechanisms but is challenging given that rate parameters are often ...
Aravind Karanam, Wouter-Jan Rappel
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Modular Random Boolean Networks [PDF]
Artificial Life, 2011 Random Boolean networks (RBNs) have been a popular model of genetic regulatory networks for more than four decades. However, most RBN studies have been made with random topologies, while real regulatory networks have been found to be modular. In this work, we extend classical RBNs to define modular RBNs.
Rodrigo Poblanno-Balp, Carlos Gershenson
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Are self-organizing biochemical networks emergent? [PDF]
, 2009 Biochemical networks are often called upon to illustrate emergent properties of living systems. In this contribution, I question such emergentist claims by means of theoretical work on genetic regulatory models and random Boolean networks.
Malaterre, Christophe, C. Malaterre
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optPBN: an optimisation toolbox for probabilistic Boolean networks.
PLoS ONE, 2014 BackgroundThere exist several computational tools which allow for the optimisation and inference of biological networks using a Boolean formalism. Nevertheless, the results from such tools yield only limited quantitative insights into the complexity of ...
Panuwat Trairatphisan +4 more
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On Fixable Families of Boolean Networks [PDF]
, 2018 The asynchronous dynamics associated with a Boolean network $f : \{0,1\}^n \to \{0,1\}^n$ is a finite deterministic automaton considered in many applications. The set of states is $\{0,1\}^n$, the alphabet is $[n]$, and the action of letter $i$ on a state $x$ consists in either switching the $i$th component if $f_i(x)\neq x_i$ or doing nothing ...
Maximilien Gadouleau, Adrien Richard
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