Results 111 to 120 of about 12,625 (251)

Genome-Wide Comparison of Carbohydrate-Active Enzymes (CAZymes) Repertoire of Flammulina ononidis [PDF]

Mycobiology, 2018
Whole-genome sequencing of Flammulina ononidis, a wood-rotting basidiomycete, was performed to identify genes associated with carbohydrate-active enzymes (CAZymes). A total of 12,586 gene structures with an average length of 2009 bp were predicted by the AUGUSTUS tool from a total 35,524,258 bp length of de novo genome assembly (49.76% GC). Orthologous
Young-Jin Park, Won-Sik Kong
openaire   +3 more sources

CAZyme from gut microbiome for efficient lignocellulose degradation and biofuel production

Frontiers in Chemical Engineering, 2022
Over-exploitation and energy security concerns of the diminishing fossil fuels is a challenge to the present global economy. Further, the negative impact of greenhouse gases released using conventional fuels has led to the need for searching for alternative biofuel sources with biomass in the form of lignocellulose coming up as among the potent ...
Dixita Chettri, Susmita Nad, Ujjal Konar, Anil Kumar Verma   +3 more
openaire   +2 more sources

Functional diversity of carbohydrate-active enzymes enabling a bacterium to ferment plant biomass. [PDF]

PLoS Genetics, 2014
Microbial metabolism of plant polysaccharides is an important part of environmental carbon cycling, human nutrition, and industrial processes based on cellulosic bioconversion.
Magali Boutard, Tristan Cerisy, Pierre-Yves Nogue, Adriana Alberti, Jean Weissenbach, Marcel Salanoubat, Andrew C Tolonen   +6 more
doaj   +1 more source

Defining functional diversity for lignocellulose degradation in a microbial community using multi-omics studies [PDF]

, 2018
\ud \ud Background\ud Lignocellulose is one of the most abundant forms of fixed carbon in the biosphere. Current industrial approaches to the degradation of lignocellulose employ enzyme mixtures, usually from
A Klindworth, A Krogh, A Medina, Adam A. Dowle, AE Pérez-Cobas, AK Biswal, AL Pometto, AM Alessi, Anna M. Alessi, AS Johnson-Rollings, B Xiao, BL Mello, BL Mello, C Damon, C Quast, C Trapnell, C Wang, CA Rezende, CJ Newbold, CW Simmons, D Floudas, DA Neher, DH Huson, DJ Jiménez, DJ Jiménez, DJ Jiménez, EA Franzosa, Eduardo R. deAzevedo, EH Novotny, Etelvino H. Novotny, F Francocci, GR Lewin, H Nielsen, H Piao, H Teeling, H Wei, Igor Polikarpov, J Liang, J Ni, J. Peter W. Young, JA López-González, Joseph P. Bennett, K Hadziavdic, L Chen, L Cortes-Tolalpa, LF Martins, LP Antunes, LR Lynd, M Garber, M Lever, M Martín-Cereceda, M Saleem, MG Grabherr, N Ivanova, Neil C. Bruce, Nicola C. Oates, NP McNulty, OE Petrova, OU Mason, P Rice, R Sun, RH Wilson, RI Griffiths, RJ Ram, RL Johnson, S Heiss-Blanquet, S Wu, SA Eichorst, SC Goslee, Simon J. McQueen-Mason, ST Bates, Susannah M. Bird, T Schneider, V Gannes de, V Gannes de, V Lionetti, VS Varma, W Mhuantong, Y Ishihama, Y Xia, Y Yin, Yi Li   +81 more
core   +4 more sources

The 3D genome of Gigaspora margarita unveils stable chromatin and nucleolar organization and symbiont‐dependent genome dynamics

New Phytologist, EarlyView.
Summary Arbuscular mycorrhizal fungi (AMF) are widespread plant symbionts that enhance nutrient acquisition and influence ecosystem productivity. Previous chromosome‐level assemblies of the model species Rhizophagus irregularis revealed a two‐compartment genome architecture (active A and repressed B chromatin compartments), yet its conservation across ...
Ken Mugambi, Jordana Oliveira, Franco Magurno, Alessandra Salvioli di Fossalunga, Mara Novero, Luisa Lanfranco, Stefano Ghignone, Gökalp Yildirir, Yan Wang, Paola Bonfante, Nicolas Corradi   +10 more
wiley   +1 more source

Recombinant protein production facility for fungal biomass-degrading enzymes using the yeast Pichia pastoris [PDF]

, 2015
International audienceFilamentous fungi are the predominant source of lignocellulolytic enzymes used in industry for the transformation of plant biomass into high-value molecules and biofuels.
Berrin, Jean-Guy, Bignon, Christophe, Grisel, Sacha, Gruet, Antoine, Haon, Mireille, Navarro, David   +5 more
core   +4 more sources

Genomic and Transcriptomic Analyses Provide Insights Into Erysiphe necator Pathogenicity and Grapevine Response

Plant Biotechnology Journal, EarlyView.
ABSTRACT Grapevine powdery mildew, caused by the fungus Erysiphe necator, is one of the most prevalent obligate biotrophic pathogens in vineyards, posing a significant threat to grape production. Despite its impact, research on E. necator pathogenicity and grapevine responses remains limited.
Bo Mu, Ruixin Tang, Zhaolin Teng, Jinfu Chen, Kaicheng Cui, Feng Wei, Wenxiang Kong, Shunyuan Xiao, Xiangnan Xu, Jia‐Yue Feng, Ying‐Qiang Wen   +10 more
wiley   +1 more source

GLP‐1 agonists and the gut microbiome: A bidirectional relationship

British Journal of Clinical Pharmacology, Volume 92, Issue 5, Page 1309-1325, May 2026.
Abstract Glucagon‐like peptide‐1 (GLP‐1) receptor agonists have transformed the management of type 2 diabetes mellitus (T2DM) and obesity, yet their interactions with the gut microbiome remain an emerging frontier in pharmacological and metabolic research.
Srinivas Kamath, Nicole S. L. Chan, Paul Joyce   +2 more
wiley   +1 more source

Proteomic Analysis of the Secretome of Cellulomonas fimi ATCC 484 and Cellulomonas flavigena ATCC 482. [PDF]

PLoS ONE, 2016
The bacteria in the genus Cellulomonas are known for their ability to degrade plant cell wall biomass. Cellulomonas fimi ATCC 484 and C. flavigena ATCC 482 have been the subject of much research into secreted cellulases and hemicellulases.
Warren W Wakarchuk, Denis Brochu, Simon Foote, Anna Robotham, Hirak Saxena, Tamara Erak, John Kelly   +6 more
doaj   +1 more source

Novel GH115 xylan α‐1,2‐glucuronidases with distinct preferences for xylan‐derived oligomers and polymers

Protein Science, Volume 35, Issue 5, May 2026.
Abstract Natural polymers are promising sustainable materials for diverse applications. Xylans, major components of hemicellulose, exhibit origin‐dependent substitution patterns that determine their physicochemical properties. Targeted enzymatic modification of these substituents offers a mild and precise approach for tailoring the polymer's ...
Savvina Leontakianakou, Simone Balzer Le, Anders Sundin, Andrius Jasilionis, Giang‐Son Nguyen, Anna Nordborg, Lalitha D. Gottumukkala, Carl Grey, Anna Sofia Lewin, Eva Nordberg Karlsson   +9 more
wiley   +1 more source