Results 51 to 60 of about 508,394 (292)

Artificial chemical reaction optimization of neural networks for efficient prediction of stock market indices

open access: yesAin Shams Engineering Journal, 2017
The underlying system models of time series prediction are complex and not known a priori, hence, accurate and unbiased estimation cannot be always achieved using well known linear techniques.
S.C. Nayak, B.B. Misra, H.S. Behera
doaj   +1 more source

Atmospheric reaction systems as null-models to identify structural traces of evolution in metabolism. [PDF]

open access: yesPLoS ONE, 2011
The metabolism is the motor behind the biological complexity of an organism. One problem of characterizing its large-scale structure is that it is hard to know what to compare it to. All chemical reaction systems are shaped by the same physics that gives
Petter Holme, Mikael Huss, Sang Hoon Lee
doaj   +1 more source

Cell wall target fragment discovery using a low‐cost, minimal fragment library

open access: yesFEBS Letters, EarlyView.
LoCoFrag100 is a fragment library made up of 100 different compounds. Similarity between the fragments is minimized and 10 different fragments are mixed into a single cocktail, which is soaked to protein crystals. These crystals are analysed by X‐ray crystallography, revealing the binding modes of the bound fragment ligands.
Kaizhou Yan   +5 more
wiley   +1 more source

Thermodynamics of random reaction networks. [PDF]

open access: yesPLoS ONE, 2015
Reaction networks are useful for analyzing reaction systems occurring in chemistry, systems biology, or Earth system science. Despite the importance of thermodynamic disequilibrium for many of those systems, the general thermodynamic properties of ...
Jakob Fischer   +2 more
doaj   +1 more source

Finite time distributions of stochastically modeled chemical systems with absolute concentration robustness

open access: yes, 2016
Recent research in both the experimental and mathematical communities has focused on biochemical interaction systems that satisfy an "absolute concentration robustness" (ACR) property.
Anderson, David F.   +2 more
core   +1 more source

Small hydrocarbon molecules in cloud-forming Brown Dwarf and giant gas planet atmospheres [PDF]

open access: yes, 2013
We study the abundances of complex carbon-bearing molecules in the oxygen-rich dust- forming atmospheres of Brown Dwarfs and giant gas planets. The inner atmospheric re- gions that form the inner boundary for thermochemical gas-phase models are ...
Bilger, Camille   +2 more
core   +1 more source

Constructing and visualizing chemical reaction networks from pi-calculus models [PDF]

open access: yesFormal Aspects of Computing, 2013
Abstract The π -calculus, in particular its stochastic version the stochastic π -calculus, is a common modeling formalism to concisely describe the chemical reactions occurring in biochemical systems.
John, M.   +4 more
openaire   +5 more sources

The (Glg)ABCs of cyanobacteria: modelling of glycogen synthesis and functional divergence of glycogen synthases in Synechocystis sp. PCC 6803

open access: yesFEBS Letters, EarlyView.
We reconstituted Synechocystis glycogen synthesis in vitro from purified enzymes and showed that two GlgA isoenzymes produce glycogen with different architectures: GlgA1 yields denser, highly branched glycogen, whereas GlgA2 synthesizes longer, less‐branched chains.
Kenric Lee   +3 more
wiley   +1 more source

Flux networks in metabolic graphs [PDF]

open access: yes, 2009
A metabolic model can be represented as bipartite graph comprising linked reaction and metabolite nodes. Here it is shown how a network of conserved fluxes can be assigned to the edges of such a graph by combining the reaction fluxes with a conserved ...
Dantzig G B   +9 more
core   +1 more source

Structural biology of ferritin nanocages

open access: yesFEBS Letters, EarlyView.
Ferritin is a conserved iron‐storage protein that sequesters iron as a ferric mineral core within a nanocage, protecting cells from oxidative damage and maintaining iron homeostasis. This review discusses ferritin biology, structure, and function, and highlights recent cryo‐EM studies revealing mechanisms of ferritinophagy, cellular iron uptake, and ...
Eloise Mastrangelo, Flavio Di Pisa
wiley   +1 more source

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