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Codon usage bias in metagenomes
2009Codon usage (CU) bias is an effect predominant in prokaryotes whereby synonymous codons are used with different frequencies between different species and even between genes within a single genome. This effect is related to tRNA abundance and can be used to predict expressivity of proteins by comparing their CU with that of a reference set of ...
Lucić, Vedran +3 more
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Codon usage bias predicts the functional MYB10 gene in Populus
Journal of Plant Physiology, 2021Xinyuan Wu, Yanping Jing
exaly
Enhanced effective codon numbers to understand codon usage bias
BioSystems, 2022Reginald Smith
exaly
2011
Synonymous codon usage bias has been extensively studied in Bacteria and Eukaryotes and yet there has been little investigation in the third domain of life, the Archaea. In this thesis I therefore examine the coding sequences of nearly 70 species of Archaea to explore patterns of codon bias.
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Synonymous codon usage bias has been extensively studied in Bacteria and Eukaryotes and yet there has been little investigation in the third domain of life, the Archaea. In this thesis I therefore examine the coding sequences of nearly 70 species of Archaea to explore patterns of codon bias.
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The extent of codon usage bias in human RNA viruses and its evolutionary origin
Virus Research, 2003Edward C Holmes
exaly