Natural Selection as the Primary Driver of Codon Usage Bias in the Mitochondrial Genomes of Three <i>Medicago</i> Species. [PDF]
Shen Y +5 more
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Comparative Chloroplast Genomics and Codon Usage Bias Analysis in <i>Hevea</i> Genus. [PDF]
Yang Y +12 more
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Comparative Genomics of <i>Triticum, Secale,</i> and <i>Triticale</i>: Codon Usage Bias in Chloroplast Genomes and Its Implications for Evolution and Genetic Engineering. [PDF]
Tian T, Zhang Y, Du W, Wang Z.
europepmc +1 more source
Characterization of the complete chloroplast genome and comparative analysis of the phylogeny and codon usage bias of three Yunnan wild rice species. [PDF]
Li R +12 more
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Compare Analysis of Codon Usage Bias of Nuclear Genome in Eight Sapindaceae Species. [PDF]
Song Y, Shen M, Cao F, Yang X.
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Codon Usage Bias in Herpesvirus
Archives of Virology, 2010In this study, I present a comprehensive analysis of codon usage bias in 43 herpesviruses for which the whole genome has been sequenced. The values of the effective number of codons revealed that the majority of the herpesviruses did not have high codon bias, with the exceptions of only simplexviruses and some varicelloviruses.
Minghui Fu
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Codon Usage Bias: An Endless Tale
Journal of Molecular Evolution, 2021Since the genetic code is degenerate, several codons are translated to the same amino acid. Although these triplets were historically considered to be "synonymous" and therefore expected to be used at rather equal frequencies in all genomes, we now know that this is not the case. Indeed, since several coding sequences were obtained in the late '70s and
Andrés Iriarte +2 more
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Codon Usage Bias and tRNA Abundance in Drosophila
Journal of Molecular Evolution, 1997Codon usage bias of 1,117 Drosophila melanogaster genes, as well as fewer D. pseudoobscura and D. virilis genes, was examined from the perspective of relative abundance of isoaccepting tRNAs and their changes during development. We found that each amino acid contributes about equally and highly significantly to overall codon usage bias, with the ...
Jeffrey R Powell
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Codon usage bias of Catharanthus roseus
China Journal of Chinese Materia Medica, 2016This study aimed to provide guidance for the heterogenous gene expression, gene prediction and species evolution by analyzing codon usage bias of Catharanthus roseus.The codon composition and usage bias of 30 437 high-confidence coding sequences from C.roseus were analyzed and the proportion of rare codons of Escherichia coli and Saccharomyces ...
Ying, Li +4 more
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