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COFACTOR: an accurate comparative algorithm for structure-based protein function annotation [PDF]
Nucleic Acids Res., 2012 We have developed a new COFACTOR webserver for automated structure-based protein function annotation. Starting from a structural model, given by either experimental determination or computational modeling, COFACTOR first identifies template proteins of ...
Ambrish Roy, Jianyi Yang, Yang Zhang
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Peroxisomal Cofactor Transport [PDF]
Biomolecules, 2020 Peroxisomes are eukaryotic organelles that are essential for growth and development. They are highly metabolically active and house many biochemical reactions, including lipid metabolism and synthesis of signaling molecules.
Anastasija Plett +2 more
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The methanogenic redox cofactor F420 is widely synthesized by aerobic soil bacteria [PDF]
The ISME Journal, 2016 Blair Ney +12 more
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T cell subtype profiling measures exhaustion and predicts anti-PD-1 response
Scientific Reports, 2022 Anti-PD-1 therapy can provide long, durable benefit to a fraction of patients. The on-label PD-L1 test, however, does not accurately predict response.
Ian Schillebeeckx +11 more
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Biomolecules, 2023 Most naturally occurring nucleotides and nucleosides are N-glycosyl derivatives of β-d-ribose. These N-ribosides are involved in most metabolic processes that occur in cells.
Katarzyna Wozniak, Krzysztof Brzezinski
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bioRxiv, 2021 The Rossmann fold enzymes are involved in essential biochemical pathways such as nucleotide and amino acid metabolism. Their functioning relies on interaction with cofactors, small nucleoside-based compounds specifically recognized by a conserved βαβ ...
K. Kamiński +6 more
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Peroxisomal Metabolite and Cofactor Transport in Humans
Frontiers in Cell and Developmental Biology, 2021 Peroxisomes are membrane-bound organelles involved in many metabolic pathways and essential for human health. They harbor a large number of enzymes involved in the different pathways, thus requiring transport of substrates, products and cofactors ...
Serhii Chornyi +4 more
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Angewandte Chemie, 2020 Metal-organic frameworks (MOFs) have recently emerged as excellent hosting matrices for enzyme immobilization, offering superior physical and chemical protection for biocatalytic reactions.
Jieying Liang +9 more
semanticscholar +1 more source
The CoFactor database: organic cofactors in enzyme catalysis [PDF]
Bioinformatics, 2010 Abstract Motivation: Organic enzyme cofactors are involved in many enzyme reactions. Therefore, the analysis of cofactors is crucial to gain a better understanding of enzyme catalysis. To aid this, we have created the CoFactor database. Results: CoFactor provides a web interface to access hand-curated data extracted from ...
Fischer, Julia D. +2 more
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Beyond NPK: Mineral Nutrient-Mediated Modulation in Orchestrating Flowering Time
Plants, 2023 Flowering time in plants is a complex process regulated by environmental conditions such as photoperiod and temperature, as well as nutrient conditions.
Sang Eun Jun, Jae Sun Shim, Hee Jin Park
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