In silico reversal of repeat-induced point mutation (RIP) identifies the origins of repeat families and uncovers obscured duplicated genes [PDF]
, 2010 Background: Repeat-induced point mutation (RIP) is a fungal genome defence mechanism guarding against transposon invasion. RIP mutates the sequence of repeated DNA and over time renders the affected regions unrecognisable by similarity search tools such ...
Hane, J. +7 more
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Tracking fungal community responses to maize plants by DNA- and RNA-based pyrosequencing. [PDF]
PLoS ONE, 2013 We assessed soil fungal diversity and community structure at two sampling times (t1 = 47 days and t2 = 104 days of plant age) in pots associated with four maize cultivars, including two genetically modified (GM) cultivars by high-throughput ...
Eiko E Kuramae +6 more
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mBio, 2021 Although relatively few in number, studies of DNA methylation have shown that fungal DNA methylation is implicated in development, genome integrity, and genome defense.
Yo-Han Ko +3 more
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Evolutionary Relationship and the Sequence Similarities among Different Fungal Species Infecting Birds Captured from Different Areas in Denmark [PDF]
Archives of Razi Institute, 2022 Fungal diseases are the common cause of death in wild animals and birds of prey. This study was designed to investigate the development of fungal infections among wild birds in Denmark.
Z Shaker Al-Rubaiee +2 more
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Fungal DNA Extraction from Fungal Plate v1
, 2020 This protocol describes how to do fungal DNA extraction from fungal plate. This protocol is part of the Bark Beetle Mycobiome (BBM) Research Coordination Network. For more information on the BBM international network: Hulcr J, Barnes I, De Beer ZW, Duong TA, Gazis R, Johnson AJ, Jusino MA, Kasson MT, Li Y, Lynch S, Mayers C, Musvuugwa T, Roets F ...
You Li, Demian F Gomez
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DNA quantification of basidiomycetous fungi during storage of logging residues [PDF]
PeerJ, 2015 The demand for bioenergy caused an increased use of logging residues, branches and treetops that were previously left on the ground after harvesting. Residues are stored outdoors in piles and it is unclear to what extent fungi transform this material ...
Isabella Børja +3 more
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Introduction of a bead beating step improves fungal DNA extraction from selected patient specimens
International Journal of Medical Microbiology, 2020 In immunocompromised patients a colonisation with fungi carries the risk to develop serious invasive fungal infection. An early detection is therefore important, but not optimal hitherto.
Sebastian Scharf +5 more
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Host genotype shapes the foliar fungal microbiome of balsam poplar (Populus balsamifera) [PDF]
, 2013 Foliar fungal communities of plants are diverse and ubiquitous. In grasses endophytes may increase host fitness; in trees, their ecological roles are poorly understood.
Fankhauser, Johnathon D. +32 more
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Molecular Characterization of Subunit G of the Vacuolar ATPase in Pathogen Dermatophyte Trichophyton rubrum [PDF]
Iranian Journal of Public Health, 2006 Trichophyton rubrum is an anthropophilic fungus causing up to 90% of chronic cases of dermatophytosis. Several properties of this fungus have been investigated so far.
S Rezaie +3 more
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Fungal community survey of Fraxinus excelior in New Zealand [PDF]
, 2012 The European Ash tree (Fraxinus excelsior) is widely grown throughout Europe. As a large deciduous tree species, it grows a tall, domed crown and has an attractive tree shape, so it is considered as a popular amenity tree species. European Ash is planted
Chen, Jie
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