Results 11 to 20 of about 3,489,226 (291)

Comparing Microsporidia-targeting primers for environmental DNA sequencing

open access: yesParasite, 2023
Metabarcoding is a powerful tool to detect classical, and well-known “long-branch” Microsporidia in environmental samples. Several primer pairs were developed to target these unique microbial parasites, the majority of which remain undetected when using ...
Doliwa Annemie   +3 more
doaj   +1 more source

Molecular effects of site-specific phosphate-methylated primer on the structure and motions of Taq DNA polymerase

open access: yesComputational and Structural Biotechnology Journal, 2023
Polymerase chain reaction (PCR) is a powerful molecular biology assay for gene detection and quantification. Conventional DNA primers for PCR often suffer from poor sensitivity in specific gene detection.
Yi-Chen Tsai   +2 more
doaj   +1 more source

Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis

open access: yesBrazilian Journal of Infectious Diseases, 2011
Objective: The objective of this study was to analyze different primers that are commonly used in epidemiological studies for the detection of Leishmania DNA by PCR, and to compare them to the conventional direct parasite search for American cutaneous ...
Diego Molina de Oliveira, M.D.   +3 more
doaj   +1 more source

Chloroplast-specific universal primers and their uses in plant studies

open access: yesBiologia Plantarum, 2011
Universal (consensus) primers are those primers that have the ability to amplify the targeted region of DNA across a broad range of individuals in a certain group of organisms. In plants, such universal primers have been designed to target regions in the
N. Haider
doaj   +1 more source

Tracing the Pig and Cattle Origin in Processed Food and Feed Products Targeting Mitochondrial 12S rRNA Gene

open access: yesJournal of Food Quality and Hazards Control, 2021
Background: Species identification in commercially processed food and feed products is one of the important issues. This study was conducted to develop a genetic method for the detection of pig and cattle species in processed food and feed products using
D.C. Roy   +7 more
doaj  

Using long ssDNA polynucleotides to amplify STRs loci in degraded DNA samples. [PDF]

open access: yesPLoS ONE, 2017
Obtaining informative short tandem repeat (STR) profiles from degraded DNA samples is a challenging task usually undermined by locus or allele dropouts and peak-high imbalances observed in capillary electrophoresis (CE) electropherograms, especially for ...
Martín E Mautner   +5 more
doaj   +1 more source

Uji Deteksi Adulterasi Daging Babi (Sus scrofa domestica) pada Bakso Metode Loop-Mediated Isothermal Amplification

open access: yesIndonesian Journal of Human Nutrition, 2021
Composition adulteration in a product is still a serious problem. For that we need a DNA-based test method that is fast, specific and simple. In this study, a rapid test technique with the loop-mediated isothermal amplification method was applied to ...
Rahma Micho Widyanto   +6 more
doaj   +1 more source

MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species

open access: yesRoyal Society Open Science, 2015
We developed a set of universal PCR primers (MiFish-U/E) for metabarcoding environmental DNA (eDNA) from fishes. Primers were designed using aligned whole mitochondrial genome (mitogenome) sequences from 880 species, supplemented by partial mitogenome ...
M. Miya   +11 more
semanticscholar   +1 more source

16S rRNA gene primer choice impacts off-target amplification in human gastrointestinal tract biopsies and microbiome profiling

open access: yesScientific Reports, 2023
16S rRNA amplicon sequencing or, more recently, metatranscriptomic analysis are currently the only preferred methods for microbial profiling of samples containing a predominant ratio of human to bacterial DNA. However, due to the off-target amplification
Tereza Deissová   +7 more
doaj   +1 more source

The choice of universal primers and the characteristics of the species mixture determine when DNA metabarcoding can be quantitative

open access: yesMolecular Ecology, 2018
DNA metabarcoding is a technique used to survey biodiversity in many ecological settings, but there are doubts about whether it can provide quantitative results, that is, the proportions of each species in the mixture as opposed to a species list.
J. Piñol, M. A. Senar, W. Symondson
semanticscholar   +1 more source

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