Results 261 to 270 of about 149,433 (366)

Multiomics Reveal Associations Between CpG Methylation, Histone Modifications and Transcription in a Species That has Lost DNMT3, the Colorado Potato Beetle

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, EarlyView.
Despite lacking DNMT3, EM‐seq revealed CpG methylation in the Colorado potato beetle. CUT&Tag analysis showed an association of H3K36me3 and H3K27ac with transcription, with H3K36me3 mirroring CpG methylation, demonstrating epigenetic flexibility.
Zoe M. Länger, Elisa Israel, Jan Engelhardt, Agata I. Kalita, Claudia I. Keller Valsecchi, Joachim Kurtz, Sonja J. Prohaska   +6 more
wiley   +1 more source

DNA methylation landscapes in diploid and allotetraploid species in peanut. [PDF]

Plant Physiol
Gawande ND.
europepmc   +1 more source

Correction to: low coverage sequencing for repetitive DNA analysis in Passiflora edulis Sims: citogenomic characterization of transposable elements and satellite DNA [PDF]

, 2019
Vanessa Carvalho Cayres Pamponét, Margarete Magalhães Souza, Gonçalo Santos Silva, Fabienne Micheli, Cláusio Antônio Ferreira de Melo, Sárah Gomes de Oliveira, Eduardo Almeida Costa, Ronan Xavier Corrêa   +7 more
openalex   +1 more source

ATAC‐seq in Emerging Model Organisms: Challenges and Strategies

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, EarlyView.
Principle of ATAC‐seq (left), overview of arthropod species with published ATAC‐seq data (middle), summary of experimental design (right). ABSTRACT The Assay for Transposase‐Accessible Chromatin with sequencing (ATAC‐seq) is a versatile and widely utilized method for identifying potential regulatory regions, such as promoters and enhancers, within a ...
Duğçar Ebrar Erdoğan, Shadi Karimifard, Mozhgan Khodadadi, Liucong Ling, Luisa Linke, Ana Catalán, Vincent Doublet, Amanda Glaser‐Schmitt, Oliver Niehuis, Katja Nowick, Antonella Soro, Natascha Turetzek, Barbara Feldmeyer, Nico Posnien   +13 more
wiley   +1 more source

High Temperatures and Bacillus Inoculation Affect the Diversity of Bradyrhizobia in Cowpea Root Nodules

Journal of Basic Microbiology, EarlyView.
ABSTRACT Future climatic scenario predictions indicate a substantial temperature increase, reducing crop production worldwide and demanding the development of adaptations in agriculture. This study aimed to assess the impact of high temperatures and amendments with Bacillus on nodulating bradyrhizobia.
Crislaine Soares Oliveira, Juliane Rafaele Alves Barros, Viviane Siqueira Lima Silva, Paula Rose de Almeida Ribeiro, Francislene Angelotti, Paulo Ivan Fernandes‐Júnior   +5 more
wiley   +1 more source

Harnessing Nanopore Sequencing to Investigate the Epigenomic Landscape in Molar Incisor Hypomineralization-A Pilot Study. [PDF]

Int J Mol Sci
Salatino S, Cuber P, Tynior W, Gustave C, Hudy D, Chan YT, Raczkowska-Siostrzonek A, Misra R, Aleksandrowicz D, Nałęcz D, Strzelczyk JK.   +10 more
europepmc   +1 more source

Vegetation and environmental dynamics in the central part of the Kola Peninsula during the past 13.3 ka as reflected by ancient plant DNA on sediments from Lake Imandra

Journal of Quaternary Science, EarlyView.
ABSTRACT The first high‐resolution reconstruction of the vegetation and environmental changes during the last ca 13 300 cal a BP in the central part of the Kola Peninsula (NW Russia) was reconstructed based on sedimentary ancient DNA (sedaDNA) metabarcoding on sediment core Co1410 from Lake Imandra.
Anastasia Poliakova, Matthias Lenz, Martin Melles, Grigory Fedorov, Marie K. F. Merkel, Inger G. Alsos   +5 more
wiley   +1 more source

Transposable element dynamics in Xenopus laevis embryogenesis: a tale of two coexisting subgenomes. [PDF]

Mob DNA
Tittarelli E, Carotti E, Carducci F, Barucca M, Canapa A, Biscotti MA.   +5 more
europepmc   +1 more source

Daphnia‐associated bacterial communities correlate with diet quantity, environmental conditions, and epidemic size across natural outbreaks

Limnology and Oceanography, EarlyView.
Abstract Zooplankton‐associated microbiomes play an important role for host health, and contribute to ecosystem processes such as nutrient cycling. Yet, few studies have assessed how environmental gradients and biotic interactions, including parasitism and diet, may shape the microbiome composition of wild zooplankton. Here, we analyzed the microbiomes
Amruta Rajarajan, Justyna Wolinska, Jean‐Claude Walser, Nadine Tardent, Silvana Käser, Esther Keller, Piet Spaak   +6 more
wiley   +1 more source

Ecological Niche Adaptations Influence Transposable Element Dynamics in Pollinating and Non-Pollinating Fig Wasps. [PDF]

Ecol Evol
Liu J, Miao YH, Hou HX, Huang DW, Xiao JH.   +4 more
europepmc   +1 more source