Domain-swapped dimer of Pseudomonas aeruginosa cytochrome c551: structural insights into domain swapping of cytochrome c family proteins. [PDF]
PLoS ONE, 2015 Cytochrome c (cyt c) family proteins, such as horse cyt c, Pseudomonas aeruginosa cytochrome c551 (PA cyt c551), and Hydrogenobacter thermophilus cytochrome c552 (HT cyt c552), have been used as model proteins to study the relationship between the ...
Satoshi Nagao +7 more
doaj +1 more source
Understanding protein domain-swapping using structure-based models of protein folding [PDF]
Progress in Biophysics and Molecular Biology, 2017 Shachi Gosavi +1 more
exaly +2 more sources
Genome-Wide Prediction and Analysis of 3D-Domain Swapped Proteins in the Human Genome from Sequence Information. [PDF]
PLoS ONE, 2016 3D-domain swapping is one of the mechanisms of protein oligomerization and the proteins exhibiting this phenomenon have many biological functions. These proteins, which undergo domain swapping, have acquired much attention owing to their involvement in ...
Atul Kumar Upadhyay +1 more
doaj +1 more source
Domain Swapping and Retroviral Assembly [PDF]
Molecular Cell, 2005 The structure of a mammalian SCAN domain has been recently reported. The molecule is a structural homolog of the HIV-1 capsid protein and forms a domain-swapped dimer in solution. The authors propose a similar domain-swapping event facilitates HIV-1 assembly, providing a new model for protein-protein interactions underlying viral particle formation.
Kingston, Richard L., Vogt, Volker M.
openaire +2 more sources
Apoprotein Intermolecular Interactions and Heme Insertion for 3D Domain Swapping in Myoglobin [PDF]
ACS OmegaGissi Novientri +7 more
doaj +2 more sources
REC protein family expansion by the emergence of a new signaling pathway
mBio, 2023 This report presents multi-genome evidence that REC protein family expansion occurs when the emergence of new pathways gives rise to functional discordance.
Megan E. Garber +9 more
doaj +1 more source
Domain swapping is a consequence of minimal frustration [PDF]
Proceedings of the National Academy of Sciences, 2004 The same energy landscape principles associated with the folding of proteins into their monomeric conformations should also describe how these proteins oligomerize into domain-swapped conformations. We tested this hypothesis by using a simplified model for the epidermal growth factor receptor pathway substrate 8 src homology 3 domain protein, both of ...
Sichun, Yang +6 more
openaire +2 more sources
Dramatic structural changes resulting from the loss of a crucial hydrogen bond in the hinge region involved in C-terminal helix swapping in SurE: a survival protein from Salmonella typhimurium. [PDF]
PLoS ONE, 2013 Domain swapping is an interesting feature of some oligomeric proteins in which each protomer of the oligomer provides an identical surface for exclusive interaction with a segment or domain belonging to another protomer.
Yamuna Kalyani Mathiharan +3 more
doaj +1 more source
Frontiers in Microbiology, 2021 Cotton is a commercial crop of global importance. The major threat challenging the productivity in cotton has been the lepidopteron insect pest Helicoverpa armigera or cotton bollworm which voraciously feeds on various plant parts.
Kesiraju Karthik +4 more
doaj +1 more source
Structure and stability of recombinant bovine odorant-binding protein: I. Design and analysis of monomeric mutants [PDF]
PeerJ, 2016 Bovine odorant-binding protein (bOBP) differs from other lipocalins by lacking the conserved disulfide bond and for being able to form the domain-swapped dimers.
Olga V. Stepanenko +5 more
doaj +2 more sources