Results 1 to 10 of about 2,271,630 (378)

Rapid emergence of extensively drug-resistant Shigella sonnei in France

open access: yesNature Communications, 2023
There have been increasing reports of extensively drug-resistant (XDR) Shigella sonnei infections in recent years. In this laboratory surveillance study from France, the authors document the rise of XDR isolates from 2005 to 2021 and perform whole genome
Sophie Lefèvre   +11 more
doaj   +1 more source

Emergence of New ST301 Shiga Toxin-Producing Escherichia coli Clones Harboring Extra-Intestinal Virulence Traits in Europe

open access: yesToxins, 2021
O80:H2 enterohemorrhagic Escherichia coli (EHEC) of sequence type ST301 is one of the main serotypes causing European hemolytic and uremic syndrome, but also invasive infections, due to extra-intestinal virulence factors (VFs).
Aurélie Cointe   +9 more
doaj   +1 more source

Population structure analysis and laboratory monitoring of Shigella by core-genome multilocus sequence typing

open access: yesNature Communications, 2022
Lab-based surveillance of Shigella has traditionally been based on serotyping but increasing availability of whole genome sequencing could enable higher resolution typing.
Iman Yassine   +12 more
doaj   +1 more source

High Risk Clone: A Proposal of Criteria Adapted to the One Health Context with Application to Enterotoxigenic Escherichia coli in the Pig Population

open access: yesAntibiotics, 2021
The definition of a high risk clone for antibiotic resistance dissemination was initially established for human medicine. We propose a revised definition of a high risk clone adapted to the One Health context.
Maud de Lagarde   +3 more
doaj   +1 more source

Occurrence and Genomic Characterization of Clone ST1193 Clonotype 14-64 in Uncomplicated Urinary Tract Infections Caused by Escherichia coli in Spain

open access: yesMicrobiology Spectrum, 2022
We conducted a prospective, multicenter, specific pilot study on uncomplicated urinary tract infections (uUTI). One-hundred non-duplicated uropathogenic Escherichia coli (UPEC) from uUTI occurred in 2020 in women attending 15 primary care centers of a ...
Isidro García-Meniño   +7 more
doaj   +1 more source

Genomic Characterization of Escherichia coli Isolates Belonging to a New Hybrid aEPEC/ExPEC Pathotype O153:H10-A-ST10 eae-beta1 Occurred in Meat, Poultry, Wildlife and Human Diarrheagenic Samples

open access: yesAntibiotics, 2020
Different surveillance studies (2005–2015) in northwest Spain revealed the presence of eae-positive isolates of Escherichia coli O153:H10 in meat for human consumption, poultry farm, wildlife and human diarrheagenic samples.
Dafne Díaz-Jiménez   +7 more
doaj   +1 more source

Transforming Shiga toxin-producing Escherichia coli surveillance through whole genome sequencing in food safety practices

open access: yesFrontiers in Microbiology, 2023
IntroductionShiga toxin-producing Escherichia coli (STEC) is a gastrointestinal pathogen causing foodborne outbreaks. Whole Genome Sequencing (WGS) in STEC surveillance holds promise in outbreak prevention and confinement, in broadening STEC epidemiology
Stéphanie Nouws   +11 more
doaj   +1 more source

High Prevalence of ST131 Subclades C2-H30Rx and C1-M27 Among Extended-Spectrum β-Lactamase-Producing Escherichia coli Causing Human Extraintestinal Infections in Patients From Two Hospitals of Spain and France During 2015

open access: yesFrontiers in Cellular and Infection Microbiology, 2020
The present study was carried out to evaluate the prevalence of sequence type 131 (ST131) among 188 extended-spectrum β-lactamase-producing Escherichia coli (ESBL-EC) collected in 2015 in Lucus Augusti University hospital (Lugo, Spain) and AP-HP Beaujon ...
Saskia-Camille Flament-Simon   +18 more
doaj   +1 more source

Application and Perspectives of MALDI–TOF Mass Spectrometry in Clinical Microbiology Laboratories

open access: yesMicroorganisms, 2021
Early diagnosis of severe infections requires of a rapid and reliable diagnosis to initiate appropriate treatment, while avoiding unnecessary antimicrobial use and reducing associated morbidities and healthcare costs.
Eva Torres-Sangiao   +2 more
doaj   +1 more source

Surface proteins of Shiga toxin-producing Escherichia coli mediate association with milk fat globules in raw milk

open access: yesFrontiers in Microbiology, 2023
IntroductionBy adhering to host cells and colonizing tissues, bacterial pathogens can successfully establish infection. Adhesion is considered the first step of the infection process and bacterial adhesion to anti-adhesive compounds is now seen as a ...
Arthur Bagel   +10 more
doaj   +1 more source

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