Results 31 to 40 of about 4,151 (174)

Development of EST-SSR markers of Ipomoea nil.

Breeding science, 2012
Although Japanese morning glory (Ipomoea nil (L.) Roth.) has been used intensively for genetic studies, DNA markers have not been developed in Ipomoea nil sufficient to cover all chromosomes. Therefore, we conducted microsatellite (simple sequence repeats, SSR) marker development in I. nil for future genetic studies. From 92,662 expressed sequence tag (
Ly, Tong, Fukuoka, Hiroyuki, Otaka, Asami, Hoshino, Atsushi, Iida, Shigeru, Nitasaka, Eiji, Watanabe, Nobuyoshi, Kuboyama, Tsutomu   +7 more
openaire   +2 more sources

Development and evaluation of expressed sequence tag-derived microsatellite markers for hop genotyping

Biologia Plantarum, 2011
The use of expressed sequence tag-simple sequence repeat (EST-SSR) markers might reflect the better relationship among species or cultivars than markers previously used. The first set of 30 EST-SSR was developed in hop (Humulus lupulus L.).
J. Patzak, J. Matoušek
doaj   +1 more source

Development of Expressed Sequence Tag–Simple Sequence Repeat Markers Related to the Salt-Stress Response of Kenaf (Hibiscus cannabinus)

Agronomy, 2023
Kenaf is one of the most important natural cannabis plants. Molecular marker-assisted breeding is vital for accelerating the breeding process of kenaf. However, the number of kenaf markers is insufficient for molecular marker-assisted breeding.
Xia An, Qin Liu, Jinyao Ying, Jiqian Wei, Guoyun Dong, Xiahong Luo, Wenlue Li, Tingting Liu, Huaping Zhou, Lina Zou, Changli Chen   +10 more
doaj   +1 more source

Genetic diversity of Eucalyptus hybrids estimated by genomic and EST microsatellite markers

Biologia Plantarum, 2011
The knowledge of breeding impacts on the genetic diversity of hybrids of Eucalyptus is crucial to the exploration of genetic resources. We estimated genetic polymorphic parameters of 112 hybrids of Eucalyptus spp. using 10 genomic simple sequence repeats
F. B. Cupertino, J. B. Leal, R. X. Corrêa, F. A. Gaiotto   +3 more
doaj   +1 more source

Genetic diversity of cucumber estimated by morpho-physiological and EST-SSR markers [PDF]

Physiology and Molecular Biology of Plants, 2017
In the present study, genetic variation among 40 cucumber genotypes was analyzed by means of morpho-physiological traits and 21 EST-SSR markers. Diversity was observed for morpho-physiological characters like days to 50% female flowering (37-46.9, number of fruits/plant (1.33-5.80), average fruit weight (41-333), vine length (36-364), relative water ...
Sudhakar, Pandey, Waquar Akhter, Ansari, Maneesh, Pandey, Bijendra, Singh   +3 more
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Frequency, type, and distribution of EST-SSRs from three genotypes of Lolium perenne, and their conservation across orthologous sequences of Festuca arundinacea, Brachypodium distachyon, and Oryza sativa

BMC Plant Biology, 2007
Background Simple sequence repeat (SSR) markers are highly informative and widely used for genetic and breeding studies in several plant species. They are used for cultivar identification, variety protection, as anchor markers in genetic mapping, and in ...
Lübberstedt Thomas, Nielsen Klaus K, Didion Thomas, Frei Ursula K, Asp Torben   +4 more
doaj   +1 more source

Development and characterization of EST‐SSR markers for Artocarpus hypargyreus (Moraceae) [PDF]

Applications in Plant Sciences, 2016
Premise of the study:Polymorphic microsatellite markers were developed for Artocarpus hypargyreus (Moraceae), a threatened species endemic to China, to investigate the genetic diversity and structure of the species.Methods and Results:Based on the transcriptome data of A.
Haijun, Liu, Weizheng, Tan, Hongbin, Sun, Yu, Liu, Kaikai, Meng, Wenbo, Liao   +5 more
openaire   +2 more sources

Characterization and Transferable Utility of Microsatellite Markers in the Wild and Cultivated Arachis Species. [PDF]

PLoS ONE, 2016
Microsatellite or simple sequence repeat (SSR) is one of the most widely distributed molecular markers that have been widely utilized to assess genetic diversity and genetic mapping for important traits in plants.
Li Huang, Bei Wu, Jiaojiao Zhao, Haitao Li, Weigang Chen, Yanli Zheng, Xiaoping Ren, Yuning Chen, Xiaojing Zhou, Yong Lei, Boshou Liao, Huifang Jiang   +11 more
doaj   +1 more source

Towards an efficient computational mining approach to identify EST-SSR markers [PDF]

Bioinformation, 2012
Microsatellites are the markers of choice due to their high abundance reproducibility, degree of polymorphism and co-dominant nature. These are mainly used for studying the genetic variability in different species and Marker assisted selection. Expressed Sequence Tags (ESTs) serve as the main resource for Simple Sequence Repeats (SSRs).
Sahu, Jagajjit, Sen, Priyabrata, Choudhury, Manabendra Dutta, Barooah, Madhumita, Modi, Mahendra Kumar, Talukdar, Anupam Das   +5 more
openaire   +2 more sources

Transferability of the EST-SSRs developed on Nules clementine (Citrus clementina Hort ex Tan) to other Citrus species and their effectiveness for genetic mapping

BMC Genomics, 2008
Background During the last decade, numerous microsatellite markers were developed for genotyping and to identify closely related plant genotypes. In citrus, previously developed microsatellite markers were arisen from genomic libraries and more often ...
Ollitrault Patrick, Talon Manuel, Wincker Patrick, Allario Thierry, Argout Xavier, Terol Javier, Costantino Gilles, Luro François L, Morillon Raphael   +8 more
doaj   +1 more source