Results 41 to 50 of about 49,961 (216)

Structural classification of biotin carboxyl carrier proteins [PDF]

open access: yes, 2012
We gathered primary and tertiary structures of acyl-CoA carboxylases from public databases, and established that members of their biotin carboxylase (BC) and biotin carboxyl carrier protein (BCCP) domains occur in one family each and that members of ...
Cantu, David   +4 more
core   +3 more sources

Effects of Candidatus Liberibacter asiaticus infection on metagenome of Diaphorina citri gut endosymbiont

open access: yesScientific Data, 2023
Asian citrus psyllid (Diaphorina citri, D. citri) is the important vector of “Candidatus Liberibacter asiaticus” (CLas), associated with Huanglongbing, the most devastating citrus disease worldwide. CLas can affect endosymbiont abundance of D.
Qi Pan   +13 more
doaj   +1 more source

A new census of protein tandem repeats and their relationship with intrinsic disorder [PDF]

open access: yes, 2020
Protein tandem repeats (TRs) are often associated with immunity-related functions and diseases. Since that last census of protein TRs in 1999, the number of curated proteins increased more than seven-fold and new TR prediction methods were published. TRs
Anisimova, Maria   +4 more
core   +1 more source

Aquaporin evolution in fishes

open access: yesFrontiers in Physiology, 2011
Aquaporins represent a primordial group of transmembrane solvent channels that have been documented throughout the living biota. This facet alone emphasizes the positive selection pressure for proteins associated with intracellular fluid homeostasis ...
Roderick Nigel eFinn   +2 more
doaj   +1 more source

Finite Dimension: A Mathematical Tool to Analise Glycans [PDF]

open access: yes, 2018
There is a need to develop widely applicable tools to understand glycan organization, diversity and structure. We present a graph-theoretical study of a large sample of glycans in terms of finite dimension, a new metric which is an adaptation to finite ...
Alonso, Juan Manuel   +4 more
core   +2 more sources

Genome signatures, self-organizing maps and higher order phylogenies: a parametric analysis [PDF]

open access: yes, 2007
Genome signatures are data vectors derived from the compositional statistics of DNA. The self-organizing map (SOM) is a neural network method for the conceptualisation of relationships within complex data, such as genome signatures.
Gatherer, Derek
core   +4 more sources

Genome-wide metabolic (re-) annotation of Kluyveromyces lactis [PDF]

open access: yes, 2012
Even before having its genome sequence published in 2004, Kluyveromyces lactis had long been considered a model organism for studies in genetics and physiology.
Dias, Oscar   +3 more
core   +1 more source

Eliciting the Functional Taxonomy from protein annotations and taxa [PDF]

open access: yes, 2016
The advances of omics technologies have triggered the production of an enormous volume of data coming from thousands of species. Meanwhile, joint international efforts like the Gene Ontology (GO) consortium have worked to provide functional information ...
Berselli, Michele   +6 more
core   +2 more sources

Cystinosin, MPDU1, SWEETs and KDELR belong to a well-defined protein family with putative function of cargo receptors involved in vesicle trafficking. [PDF]

open access: yesPLoS ONE, 2012
Classification of proteins into families based on remote homology often helps prediction of their biological function. Here we describe prediction of protein cargo receptors involved in vesicle formation and protein trafficking.
Vladimir Saudek
doaj   +1 more source

The effects of arbuscular mycorrhizal fungi (AMF) and Rhizophagus irregularis on soil microorganisms assessed by metatranscriptomics and metaproteomics

open access: yes, 2019
Arbuscular mycorrhizal fungi (AMF) form symbioses with approximately 80% of plant species and potentially benefit their hosts (e.g. nutrient acquisition) and the soil environment (e.g. soil aggregation).
Johnston, P.   +4 more
core   +1 more source

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