Results 41 to 50 of about 52,997 (194)

The effects of arbuscular mycorrhizal fungi (AMF) and Rhizophagus irregularis on soil microorganisms assessed by metatranscriptomics and metaproteomics

, 2019
Arbuscular mycorrhizal fungi (AMF) form symbioses with approximately 80% of plant species and potentially benefit their hosts (e.g. nutrient acquisition) and the soil environment (e.g. soil aggregation).
Johnston, P., Lammel, D., Mbedi, S., Meierhofer, D., Rillig, M.   +4 more
core   +1 more source

Genome-wide metabolic (re-) annotation of Kluyveromyces lactis [PDF]

, 2012
Even before having its genome sequence published in 2004, Kluyveromyces lactis had long been considered a model organism for studies in genetics and physiology.
Dias, Oscar, Ferreira, E. C., Gombert, Andreas Karoly, Rocha, I.   +3 more
core   +1 more source

Effective gene collection from the metatranscriptome of marine microorganisms [PDF]

, 2011
Background Metagenomic studies, accelerated by the evolution of sequencing technologies and the rapid development of genomic analysis methods, can reveal genetic diversity and biodiversity in various samples including those of uncultured or unknown ...
Atsushi Ogura, Mengjie Lin, Yuya Shigenobu, Atushi Fujiwara, Kazuho Ikeo, Satoshi Nagai   +5 more
core   +1 more source

The genome sequence of the Ibiza wall lizard, Podarcis pityusensis (Boscá, 1883) [version 1; peer review: 2 approved, 1 approved with reservations]

Wellcome Open Research
Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Lepidosauria; Squamata; Bifurcata;
Joana Meier, Nathalie Feiner, Tobias Uller, Roberto Garcia-Roa, Ferran de la Cruz   +4 more
doaj   +1 more source

The All-Data-Based Evolutionary Hypothesis of Ciliated Protists with a Revised Classification of the Phylum Ciliophora (Eukaryota, Alveolata) [PDF]

, 2016
This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the ...
A Baroin-Tourancheau, A Fleury, A Kahl, A Stamatakis, AW Jankowski, B Hammerschmidt, BA Dehority, BJ Wicklow, BK Diggles, C Shao, C Shao, C Shao, CA Grolière, CF Bardele, CF Bardele, D Williams, DC Hoffman, DH Lynn, DH Lynn, DL Lipscomb, DL Lipscomb, E Gentekaki, EA Hewitt, F Abascal, F Gao, F Gao, F Gao, F Gao, F Ronquist, FM Affa’a, H Berger, H Shimodaira, H Shimodaira, H Wang, H Xu, ID da Silva Neto, J Gong, J Grain, J Huang, J Jiang, J Li, JM Feng, KL Kivimaki, L Li, L Li, L Li, LR Utz, LW Parfrey, M Dunthorn, M Dunthorn, M Kathol, M Miao, M Miao, M Miao, M Miao, MC Strüder-Kypke, MC Strüder-Kypke, MC Strüder-Kypke, MD Johnson, MK Shin, O Penn, OL Snoeyenbos-West, P Sun, P Sun, P Sun, P Sun, P Vdacny, P Vd’ačný, PC Bradbury, Pd Puytorac, Q Zhang, Q Zhang, Q Zhang, Q Zhang, S Agatha, S Agatha, S Gao, SL Schmidt, SM Adl, W Foissner, W Foissner, W Foissner, W Foissner, W Foissner, W Foissner, W Foissner, W Foissner, W Liu, W Miao, W Miao, W Orsi, W Song, WA Bourland, WW Liu, X Chen, X Chen, X Fan, X Fan, X Fan, X Pan, Y Gong, Y Gong, Z Fokam, Z Yi, Z Yi, Z Yi, Z Yi, Z Yi, Z Zhan, Z Zhan   +109 more
core   +1 more source

An evolutionary perspective on the kinome of malaria parasites [PDF]

, 2012
Malaria parasites belong to an ancient lineage that diverged very early from the main branch of eukaryotes. The approximately 90-member plasmodial kinome includes a majority of eukaryotic protein kinases that clearly cluster within the AGC, CMGC, TKL ...
Andrew B. Tobin, Carvalho T. G., Christian Doerig, Eric Talevich, Natarajan Kannan, Wells T. N., Wilson R. J.   +6 more
core   +1 more source

Massive Horizontal Gene Transfer in Bdelloid Rotifers [PDF]

, 2008
Horizontal gene transfer in metazoans has been documented in only a few species and is usually associated with endosymbiosis or parasitism. By contrast, in bdelloid rotifers we found many genes that appear to have originated in bacteria, fungi, and ...
Arkhipova, Irina, Gladyshev, Evgeniy, Meselson, Matthew   +2 more
core   +1 more source

Parasitism in Eukaryota - Reconstruction of Ancestral and Unavailable Extant States [PDF]

Biodiversity Information Science and Standards, 2018
Parasitism can be defined as an interaction between species in which one of the interaction partners, the parasite, lives in or on the other, the host. The parasite draws food from its host and harms it in the process. According to some estimates, over 40% of all eukaryotes are parasites.
Lydia Buntrock, Bernhard Renard, Emanuel Heitlinger   +2 more
openaire   +1 more source

MGM as a Large‐Scale Pretrained Foundation Model for Microbiome Analyses in Diverse Contexts

Advanced Science, EarlyView.
We present the Microbial General Model (MGM), a transformer‐based foundation model pretrained on over 260,000 microbiome samples. MGM learns contextualized microbial representations via self‐supervised language modeling, enabling robust transfer learning, cross‐regional generalization, keystone taxa discovery, and prompt‐guided generation of realistic,
Haohong Zhang, Yuli Zhang, Zixin Kang, Jiayun Xiong, Ronghua Yang, Kang Ning   +5 more
wiley   +1 more source

Chrysophanol: A Natural Anthraquinone with Multifaceted Biotherapeutic Potential

Biomolecules, 2019
Chrysophanol is a unique anthraquinone having broad-spectrum therapeutic potential along with ecological importance. It is the first polyketide that has been reported to be biosynthesized in an organism-specific manner. The traditional Chinese and Korean
Prateeksha, Mohd Aslam Yusuf, Brahma N. Singh, Surya Sudheer, Ravindra N. Kharwar, Saba Siddiqui, Ahmed M. Abdel-Azeem, Leonardo Fernandes Fraceto, Kavya Dashora, Vijai K. Gupta   +9 more
doaj   +1 more source