Results 71 to 80 of about 50,954 (215)
5SRNAdb: an information resource for 5S ribosomal RNAs [PDF]
, 2015 Ribosomal 5S RNA (5S rRNA) is the ubiquitous RNA component found in the large subunit of ribosomes in all known organisms. Due to its small size, abundance and evolutionary conservation 5S rRNA for many years now is used as a model molecule in studies on
Barciszewski, Jan +4 more
core +2 more sources
PLoS ONE, 2015 Phylogenetic profiling, a network inference method based on gene inheritance profiles, has been widely used to construct functional gene networks in microbes. However, its utility for network inference in higher eukaryotes has been limited.
Junha Shin, Insuk Lee
doaj +1 more source
Insect Molecular Biology, EarlyView.Comprehensive genome and stage‐specific transcriptomes reveal 14,637 genes in Listronotus oregonensis, advancing genetic insights into a key agricultural pest. Compared with related species, L. oregonensis exhibits reduced chemoreceptor gene families but expanded detoxification gene clusters, reflecting its narrow host range and adaptability.
Dave T. Ste‐Croix +2 more
wiley +1 more source
Maximum-likelihood tree estimation using codon substitution models with multiple partitions [PDF]
, 2015 Erworben im Rahmen der Schweizer Nationallizenzen (http://www.nationallizenzen.ch)Many protein sequences have distinct domains that evolve with different rates, different selective pressures, or may differ in codon bias.
Anisimova, Maria +2 more
core +1 more source
BMC Microbiology, 2017 Background Representatives of the genus Bacillus are increasingly used in agriculture to promote plant growth and to protect against plant pathogens. Unfortunately, hitherto the impact of Bacillus inoculants on the indigenous plant microbiota has been ...
Junqing Qiao +5 more
doaj +1 more source
Minimum Contradiction Matrices in Whole Genome Phylogenies
Evolutionary Bioinformatics, 2008 Minimum contradiction matrices are a useful complement to distance-based phylogenies. A minimum contradiction matrix represents phylogenetic information under the form of an ordered distance matrix Y i , j n . A matrix element corresponds to the distance
Marc Thuillard
doaj +2 more sources
Molecular Ecology, EarlyView.ABSTRACT Genetic diversity is a fundamental aspect of biodiversity, yet it is rarely assessed and monitored in conservation practice. Unionid freshwater mussels exemplify the dramatic loss of biodiversity in freshwater ecosystems, yet genomic data for these ecologically important species remain scarce.
Ellika Faust +6 more
wiley +1 more source
Molecular Ecology, EarlyView.ABSTRACT Eukaryotic microalgae are key organisms in marine environments, contributing to essential nutrient and biogeochemical cycles. Climate change is already causing shifts in the composition and diversity of microalgal assemblages, with coastal ecosystems experiencing increased pressure.
Jacqui Stuart +7 more
wiley +1 more source
Automatic generation of pseudoknotted RNAs taxonomy
BMC Bioinformatics, 2023 Background The ability to compare RNA secondary structures is important in understanding their biological function and for grouping similar organisms into families by looking at evolutionarily conserved sequences such as 16S rRNA. Most comparison methods
Michela Quadrini +2 more
doaj +1 more source
Frontiers in Microbiology, 2021 Advances in high-throughput sequencing technologies have enabled extensive studies of freshwater biofilms and significant breakthroughs in biofilm meta-omics.
Yuan Yao +3 more
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