Results 11 to 20 of about 557,186 (345)
Systematic Functional Annotation Workflow for Insects
Insects, 2022 Next-generation sequencing has revolutionized entomological study, rendering it possible to analyze the genomes and transcriptomes of non-model insects.
Hidemasa Bono +3 more
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Functional annotation of hierarchical modularity.
PLoS ONE, 2012 In biological networks of molecular interactions in a cell, network motifs that are biologically relevant are also functionally coherent, or form functional modules.
Kanchana Padmanabhan +2 more
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Annotating microbial functions with ProkFunFind
mSystemsAnalyzing microbial genomes has become an essential part of microbiology research, giving valuable insights into the functions and evolution of microbial species.
Keith Dufault-Thompson, Xiaofang Jiang
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Combining multiple functional annotation tools increases coverage of metabolic annotation [PDF]
BMC Genomics, 2018 Background Genome-scale metabolic modeling is a cornerstone of systems biology analysis of microbial organisms and communities, yet these genome-scale modeling efforts are invariably based on incomplete functional annotations. Annotated genomes typically
Marc Griesemer +4 more
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Comparing functional annotation analyses with Catmap [PDF]
BMC Bioinformatics, 2004 Background Ranked gene lists from microarray experiments are usually analysed by assigning significance to predefined gene categories, e.g., based on functional annotations. Tools performing such analyses are often restricted to a category score based on
Krogh Morten +2 more
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Editorial: Functional Annotation of Animal Genomes [PDF]
Frontiers in Genetics, 2021 Editorial on the Research Topic Functional Annotation of Farm Animal Genomes All fields of biology have been greatly influenced by the generation of complete and well-annotated genome assemblies. This impact is most apparent with the findings and resulting applications from the Human Genome Project (HGP), which has transformed biomedical science.
Amanda Jane Chamberlain +5 more
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XACML Function Annotations [PDF]
Eighth IEEE International Workshop on Policies for Distributed Systems and Networks (POLICY'07), 2007 XACML is being increasingly adopted in large enterprise systems for specifying access control policies. However, the efficient analysis and integration of multiple policies in such large distributed systems still remains a difficult task. In this paper, we propose an annotation technique which is a simple extension to XACML, and may greatly benefit the
Rao, Prathima, Lin, Dan, Bertino, Elisa
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ConFunc—functional annotation in the twilight zone [PDF]
Bioinformatics, 2008 Abstract Motivation: The success of genome sequencing has resulted in many protein sequences without functional annotation. We present ConFunc, an automated Gene Ontology (GO)-based protein function prediction approach, which uses conserved residues to generate sequence profiles to infer function.
Mark N. Wass, Michael J.E. Sternberg
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Workflows for Rapid Functional Annotation of Diverse Arthropod Genomes
Insects, 2021 Genome sequencing of a diverse array of arthropod genomes is already underway, and these genomes will be used to study human health, agriculture, biodiversity, and ecology.
Surya Saha +4 more
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Evaluation of a hybrid approach using UBLAST and BLASTX for metagenomic sequences annotation of specific functional genes. [PDF]
PLoS ONE, 2014 The fast development of next generation sequencing (NGS) has dramatically increased the application of metagenomics in various aspects. Functional annotation is a major step in the metagenomics studies.
Ying Yang, Xiao-Tao Jiang, Tong Zhang
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