Results 41 to 50 of about 563,469 (347)
Tissue resolved, gene structure refined equine transcriptome. [PDF]
, 2017 BackgroundTranscriptome interpretation relies on a good-quality reference transcriptome for accurate quantification of gene expression as well as functional analysis of genetic variants.
Bellone, RR +9 more
core +1 more source
Frontiers in Genetics, 2014 With the advancement of new high throughput sequencing technologies, there has been an increase in the number of genome sequencing projects worldwide, which has yielded complete genome sequences of human, animals and plants.
Gaston K Mazandu, Nicola eMulder
doaj +1 more source
Metatranscriptomes from diverse microbial communities: assessment of data reduction techniques for rigorous annotation [PDF]
, 2014 Background Metatranscriptome sequence data can contain highly redundant sequences from diverse populations of microbes and so data reduction techniques are often applied before taxonomic and functional annotation.
Mock, Thomas +3 more
core +1 more source
Escherichia coli EHEC Germany outbreak preliminary functional annotation using BG7 system [PDF]
, 2011 We have annotated the European outbreak E. coli EHEC genome sequenced by BGI (6-2-2011) and assembled with MIRA by Nick Loman (6-2-2011 ). Our system BG7, Bacterial Genome annotation of Era7 Bioinformatics, predicts ORFs and annotates them based on ...
Eduardo Pareja +4 more
core +2 more sources
The first draft genome assembly and data analysis of the Malaysian mahseer (Tor tambroides)
Aquaculture and Fisheries, 2023 The Malaysian mahseer (Tor tambroides), one of the most valuable freshwater fish in the world, is mainly targeted for human consumption. The mitogenomic data of this species is available to date, but the genomic information is still lacking.
Melinda Mei Lin Lau +3 more
doaj +1 more source
The Bologna Annotation Resource (BAR 3.0): improving protein functional annotation [PDF]
Nucleic Acids Research, 2017 BAR 3.0 updates our server BAR (Bologna Annotation Resource) for predicting protein structural and functional features from sequence. We increase data volume, query capabilities and information conveyed to the user. The core of BAR 3.0 is a graph-based clustering procedure of UniProtKB sequences, following strict pairwise similarity criteria (sequence ...
PROFITI, GIUSEPPE +2 more
openaire +3 more sources
SFannotation: A Simple and Fast Protein Function Annotation System [PDF]
Genomics & Informatics, 2014 Owing to the generation of vast amounts of sequencing data by using cost-effective, high-throughput sequencing technologies with improved computational approaches, many putative proteins have been discovered after assembly and structural annotation ...
Dong Su Yu, Byung Kwon Kim
doaj +1 more source
Clinically Relevant Functional Annotation of Genotype [PDF]
Circulation: Cardiovascular Genetics, 2014 Genetic testing was originally thought likely to generate deterministic predictions of many clinical outcomes in inherited disorders. Indeed, this premise was one of the original drivers of the precision medicine movement. However, the variable expression of final phenotypes even in the setting of large genetic effects has long reinforced the ...
Calum A, MacRae, Ramachandran S, Vasan
openaire +2 more sources
Evidence attribution in the UniProt Knowledgebase [PDF]
, 2009 UniProtKB provides the scientific community with a comprehensive collection of protein sequence records containing extensive curated information including functional and sequence annotation.
Michele Magrane, UniProt Consortium
core +2 more sources
htsint: a Python library for sequencing pipelines that combines data through gene set generation [PDF]
, 2015 Background: Sequencing technologies provide a wealth of details in terms of genes, expression, splice variants, polymorphisms, and other features. A standard for sequencing analysis pipelines is to put genomic or transcriptomic features into a context of
Bonneaud, Camille +2 more
core +3 more sources