Results 31 to 40 of about 361,695 (297)

Wide-coverage deep statistical parsing using automatic dependency structure annotation [PDF]

, 2008
A number of researchers (Lin 1995; Carroll, Briscoe, and Sanfilippo 1998; Carroll et al. 2002; Clark and Hockenmaier 2002; King et al. 2003; Preiss 2003; Kaplan et al. 2004;Miyao and Tsujii 2004) have convincingly argued for the use of dependency (rather
O'Donovan, Ruth, Cahill, Aoife, O\u27Donovan, Ruth, Riezler, Stefan, Way, Andy, van Genabith, Josef, Burke, Michael   +6 more
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Phylogenetic molecular function annotation

Journal of Physics: Conference Series, 2009
It is now easier to discover thousands of protein sequences in a new microbial genome than it is to biochemically characterize the specific activity of a single protein of unknown function. The molecular functions of protein sequences have typically been predicted using homology-based computational methods, which rely on the principle that homologous ...
Barbara E, Engelhardt, Michael I, Jordan, Susanna T, Repo, Steven E, Brenner   +3 more
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On gene ontology and function annotation [PDF]

Bioinformation, 2006
The effort of function annotation does not merely involve associating a gene with some structured vocabulary that describes action. Rather the details of the actions, the components of the actions, the larger context of the actions are important issues that are of direct relevance, because they help understand the biological system to which the gene ...
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The use of semantic similarity measures for optimally integrating heterogeneous Gene Ontology data from large scale annotation pipelines

Frontiers in Genetics, 2014
With the advancement of new high throughput sequencing technologies, there has been an increase in the number of genome sequencing projects worldwide, which has yielded complete genome sequences of human, animals and plants.
Gaston K Mazandu, Nicola eMulder
doaj   +1 more source

Functional Annotation Analytics of Rhodopseudomonas palustris Genomes

Bioinformatics and Biology Insights, 2011
Rhodopseudomonas palustris, a nonsulphur purple photosynthetic bacteria, has been extensively investigated for its metabolic versatility including ability to produce hydrogen gas from sunlight and biomass.
Shaneka S. Simmons, Raphael D. Isokpehi, Shyretha D. Brown, Donee L. McAllister, Charnia C. Hall, Wanaki M. McDuffy, Tamara L. Medley, Udensi K. Udensi, Rajendram V. Rajnarayanan, Wellington K. Ayensu, Hari H.P. Cohly   +10 more
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Comparison of three microarray probe annotation pipelines: differences in strategies and their effect on downstream analysis [PDF]

, 2009
BACKGROUND: Reliable annotation linking oligonucleotide probes to target genes is essential for functional biological analysis of microarray experiments.
Groenen, M.A., Leunissen, J.A., Neerincx, P.B.T., Groenen, M.A.M., Pierrot Casel, Casel, P., Michael Watson, Neerincx, P.B., Christophe Klopp, Klopp, C., Pieter Neerincx, Dennis Prickett, Martien Groenen, Nie, H., Jack Leunissen, Haisheng Nie, Watson, M., Leunissen, J.A.M., Prickett, D.   +18 more
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The first draft genome assembly and data analysis of the Malaysian mahseer (Tor tambroides)

Aquaculture and Fisheries, 2023
The Malaysian mahseer (Tor tambroides), one of the most valuable freshwater fish in the world, is mainly targeted for human consumption. The mitogenomic data of this species is available to date, but the genomic information is still lacking.
Melinda Mei Lin Lau, Leonard Whye Kit Lim, Hung Hui Chung, Han Ming Gan   +3 more
doaj   +1 more source

A Semantic Web Annotation Tool for a Web-Based Audio Sequencer [PDF]

, 2011
Music and sound have a rich semantic structure which is so clear to the composer and the listener, but that remains mostly hidden to computing machinery.
Rizzo, Giuseppe, Morando, Federico, De Martin, Juan Carlos, Servetti, Antonio, Restagno L., Luca Restagno, Vincent Akkermans, Giuseppe Rizzo, Antonio Servetti, Akkermans V., Restagno, L., Akkermans, V.   +11 more
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An in silico approach for structural and functional annotation of matrix protein of Nipah henipavirus: A protein functional analysis

, 2021
Nipah henipavirus is an emerging RNA virus with increased mortality threatening global security. In South and Southeast Asia, the Nipah virus has caused numerous disease outbreaks.
Apurbo Kumar, Paul, Abu Saim Mohammad , Saikat   +1 more
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A functional annotation of subproteomes in human plasma [PDF]

PROTEOMICS, 2005
AbstractThe data collected by Human Proteome Organization's Plasma Proteome Pilot project phase was analyzed by members of our working group. Accordingly, a functional annotation of the human plasma proteome was carried out. Here, we report the findings of our analyses.
Ping, P., Vondriska, T. M., Creighton, Chad J., Gandhi, T. K. B., Yang, Ziping, Menon, Rajasree, Kwon, Min-Seok, Drwal, G., Kellman, M., Peri, S., Suresh, S., Gronborg, M., Molina, H., Chaerkady, R., Rekha, B., Muthusamy, B., Shet, A. S., Gerszten, R. E., Wu, Haifeng, Raftery, M., Wasinger, V., Schulze-Knappe, P., Hanash, Samir M., Paik, Young-Ki, Hancock, W. S., States, David J., Omenn, Gilbert S., Pandey, A.   +27 more
openaire   +3 more sources