Results 1 to 10 of about 401,494 (259)

Gene Mutation Annotation and Pedigree for Pulmonary Arterial Hypertension Patients in Han Chinese Patients

Global Heart, 2021
Background: The etiology of pulmonary arterial hypertension (PAH) in the Han Chinese population is poorly understood. Objectives: The aim of this study was to assess gene variants and associated functional annotations for PAH in Han Chinese patients ...
Mei-Tzu Wang, Ming-Ji Charng, Pei-Ling Chi, Chin-Chang Cheng, Cheng Chung Hung, Wei-Chun Huang   +5 more
doaj   +1 more source

Maize microarray annotation database

Plant Methods, 2011
Background Microarray technology has matured over the past fifteen years into a cost-effective solution with established data analysis protocols for global gene expression profiling.
Berger Dave K, Myburg Alexander A, Coetzer Nanette   +2 more
doaj   +1 more source

Characterization of Genetic and Allelic Diversity Amongst Cultivated and Wild Lentil Accessions for Germplasm Enhancement

Frontiers in Genetics, 2020
Intensive breeding of cultivated lentil has resulted in a relatively narrow genetic base, which limits the options to increase crop productivity through selection.
Ruwani Dissanayake, Ruwani Dissanayake, Shivraj Braich, Shivraj Braich, Noel O. I. Cogan, Noel O. I. Cogan, Kevin Smith, Kevin Smith, Sukhjiwan Kaur   +8 more
doaj   +1 more source

GARNET – gene set analysis with exploration of annotation relations

BMC Bioinformatics, 2011
Background Gene set analysis is a powerful method of deducing biological meaning for an a priori defined set of genes. Numerous tools have been developed to test statistical enrichment or depletion in specific pathways or gene ontology (GO) terms.
Seo Jihae, Bae Taejeong, Lee Sanghyun, Jang Youngjun, Kim Bumjin, Rho Kyoohyoung, Seo Chaehwa, Lee Jihyun, Kang Hyunjung, Yu Ungsik, Kim Sunghoon, Lee Sanghyuk, Kim Wan Kyu   +12 more
doaj   +1 more source

DROPA: DRIP-seq optimized peak annotator

BMC Bioinformatics, 2019
Background R-loops are three-stranded nucleic acid structures that usually form during transcription and that may lead to gene regulation or genome instability.
Marco Russo, Bruno De Lucca, Tiziano Flati, Silvia Gioiosa, Giovanni Chillemi, Giovanni Capranico   +5 more
doaj   +1 more source

Gene Annotation Easy Viewer (GAEV): Integrating KEGG’s Gene Function Annotations and Associated Molecular Pathways [version 2; referees: 1 approved, 2 approved with reservations]

F1000Research, 2018
We developed a Gene Annotation Easy Viewer (GAEV) that integrates the gene annotation data from the KEGG (Kyoto Encyclopedia of Genes and Genomes) Automatic Annotation Server.
Trung Huynh, Sen Xu
doaj   +1 more source

Gene Annotation Easy Viewer (GAEV): Integrating KEGG’s Gene Function Annotations and Associated Molecular Pathways [version 3; peer review: 1 approved, 2 approved with reservations]

F1000Research, 2019
We developed a Gene Annotation Easy Viewer (GAEV) that integrates the gene annotation data from the KEGG (Kyoto Encyclopedia of Genes and Genomes) Automatic Annotation Server.
Trung Huynh, Sen Xu
doaj   +1 more source

Re-annotation is an essential step in systems biology modeling of functional genomics data. [PDF]

PLoS ONE, 2010
One motivation of systems biology research is to understand gene functions and interactions from functional genomics data such as that derived from microarrays.
Bart H J van den Berg, Fiona M McCarthy, Susan J Lamont, Shane C Burgess   +3 more
doaj   +1 more source

ARMOUR – A Rice miRNA: mRNA Interaction Resource

Frontiers in Plant Science, 2018
ARMOUR was developed as ARice miRNA:mRNA interaction resource. This informative and interactive database includes the experimentally validated expression profiles of miRNAs under different developmental and abiotic stress conditions across seven Indian ...
Neeti Sanan-Mishra, Anita Tripathi, Kavita Goswami, Rohit N. Shukla, Madavan Vasudevan, Hitesh Goswami   +5 more
doaj   +1 more source

SynGAP: a synteny-based toolkit for gene structure annotation polishing

Genome Biology
Genome sequencing has become a routine task for biologists, but the challenge of gene structure annotation persists, impeding accurate genomic and genetic research.
Fengqi Wu, Yingxiao Mai, Chengjie Chen, Rui Xia   +3 more
doaj   +1 more source