Results 41 to 50 of about 401,494 (259)
COGNATE: comparative gene annotation characterizer
BMC Genomics, 2017 Background The comparison of gene and genome structures across species has the potential to reveal major trends of genome evolution. However, such a comparative approach is currently hampered by a lack of standardization (e.g., Elliott TA, Gregory TR ...
Jeanne Wilbrandt +2 more
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Discovery of a Novel Intron in US10/US11/US12 of HSV-1 Strain 17
Viruses, 2023 Herpes Simplex Virus type 1 (HSV-1) infects humans and causes a variety of clinical manifestations. Many HSV-1 genomes have been sequenced with high-throughput sequencing technologies and the annotation of these genome sequences heavily relies on the ...
Weizhong Chang +4 more
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Evaluating Computational Gene Ontology Annotations [PDF]
, 2016 ISBN:978-1-4939-3743 ...
Škunca, Nives +2 more
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GoFigure: Automated Gene Ontology™ annotation [PDF]
Bioinformatics, 2003 Abstract Summary: We have developed a web tool to predict Gene Ontology (GO) terms. The tool accepts an input DNA or protein sequence, and uses BLAST to identify homologous sequences in GO annotated databases. A graph is returned to the user via email. Availability: The tool is freely available at: http://udgenome.ags.udel.
Salim Khan +3 more
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EuCAP, a Eukaryotic Community Annotation Package, and its application to the rice genome
BMC Genomics, 2007 Background Despite the improvements of tools for automated annotation of genome sequences, manual curation at the structural and functional level can provide an increased level of refinement to genome annotation.
Hamilton John P +4 more
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Non‐homology‐based prediction of gene functions in maize (Zea mays ssp. mays)
The Plant Genome, 2020 Advances in genome sequencing and annotation have eased the difficulty of identifying new gene sequences. Predicting the functions of these newly identified genes remains challenging.
Xiuru Dai +6 more
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mSphere, 2023 The implementation of artemisinin (ART) combination therapies (ACTs) has greatly decreased deaths caused by Plasmodium falciparum malaria, but increasing ACT resistance in Southeast Asia and Africa could reverse this progress. Parasite population genetic
Caroline Simmons +11 more
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GoGene: gene annotation in the fast lane [PDF]
Nucleic Acids Research, 2009 High-throughput screens such as microarrays and RNAi screens produce huge amounts of data. They typically result in hundreds of genes, which are often further explored and clustered via enriched GeneOntology terms. The strength of such analyses is that they build on high-quality manual annotations provided with the GeneOntology.
Conrad Plake +4 more
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Annotation extension through protein family annotation coherence metrics
Frontiers in Genetics, 2013 Protein functional annotation consists in associating proteins with textual descriptors elucidating their biological roles. The bulk of annotation is done via automated procedures that ultimately rely on annotation transfer.
Hugo Paulo Bastos +2 more
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Chromosome-level genome assembly of Fragaria pentaphylla using PacBio and Hi-C technologies
Frontiers in Genetics, 2022 Fragaria pentaphylla, a wild diploid quinquefoliolate species of Fragaria, is native to Southwest China. It has two morphs of red and white fruit color in nature and has characteristics of unique fragrance and resistance, which made it not only a ...
Rui Sun +32 more
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