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The Gene Ontology: enhancements for 2011. [PDF]
Nucleic Acids Research, 2012 The Gene Ontology (GO) (http://www.geneontology.org) is a community bioinformatics resource that represents gene product function through the use of structured, controlled vocabularies.
Gene Ontology Consortium
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The Gene Ontology project in 2008. [PDF]
Nucleic Acids Research, 2008 The Gene Ontology (GO) project (http://www.geneontology.org/) provides a set of structured, controlled vocabularies for community use in annotating genes, gene products and sequences (also see http://www.sequenceontology.org/).
Gene Ontology Consortium
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How the gene ontology evolves [PDF]
BMC Bioinformatics, 2011 Background Maintaining a bio-ontology in the long term requires improving and updating its contents so that it adequately captures what is known about biological phenomena.
Leonelli Sabina +4 more
doaj +5 more sources
The Gene Ontology in 2010: extensions and refinements. [PDF]
Nucleic Acids Research, 2010 The Gene Ontology (GO) Consortium (http://www.geneontology.org) (GOC) continues to develop, maintain and use a set of structured, controlled vocabularies for the annotation of genes, gene products and sequences.
Gene Ontology Consortium
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The Neural/Immune Gene Ontology: clipping the Gene Ontology for neurological and immunological systems [PDF]
BMC Bioinformatics, 2010 Background The Gene Ontology (GO) is used to describe genes and gene products from many organisms. When used for functional annotation of microarray data, GO is often slimmed by editing so that only higher level terms remain. This practice is designed to
Rubin Eitan +2 more
doaj +4 more sources
A Gene Ontology Tutorial in Python. [PDF]
, 2017 This chapter is a tutorial on using Gene Ontology resources in the Python programming language. This entails querying the Gene Ontology graph, retrieving Gene Ontology annotations, performing gene enrichment analyses, and computing basic semantic ...
Dessimoz, C., Vesztrocy, A.W.
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Expansion of the Gene Ontology knowledgebase and resources [PDF]
Nucleic Acids Research, 2016 The Gene Ontology (GO) is a comprehensive resource of computable knowledge regarding the functions of genes and gene products. As such, it is extensively used by the biomedical research community for the analysis of -omics and related data.
The Gene Ontology Consortium, .
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From Plant Ontology to Gene Ontology and back
Current Plant Biology, 2018 Our recent goal for the Plant Ontology (PO) is to have it integrated with the Gene Ontology (GO). The simplest aspect of this is to link morphological and anatomical images of structures for PO terms with genes involved in the development of those ...
Dennis Stevenson, Cecilia Zumajo-Cardona
doaj +4 more sources
Mining Gene Ontology Data with AGENDA
Bioinformatics and Biology Insights, 2012 The Gene Ontology (GO) initiative is a collaborative effort that uses controlled vocabularies for annotating genetic information. We here present AGENDA ( A pplication for mining Gen e Ontology Da ta), a novel web-based tool for accessing the GO database.
Martin C. Göpfert +2 more
doaj +6 more sources
Measuring the evolution of ontology complexity: the gene ontology case study. [PDF]
PLoS ONE, 2013 Ontologies support automatic sharing, combination and analysis of life sciences data. They undergo regular curation and enrichment. We studied the impact of an ontology evolution on its structural complexity.
Olivier Dameron +2 more
doaj +7 more sources