Results 11 to 20 of about 1,646,507 (307)

Genome Mining as New Challenge in Natural Products Discovery [PDF]

open access: yesMarine Drugs, 2020
Drug discovery is based on bioactivity screening of natural sources, traditionally represented by bacteria fungi and plants. Bioactive natural products and their secondary metabolites have represented the main source for new therapeutic agents, used as ...
Nadia Ruocco   +2 more
exaly   +4 more sources

Mini Review: Genome Mining Approaches for the Identification of Secondary Metabolite Biosynthetic Gene Clusters in Streptomyces

open access: yesComputational and Structural Biotechnology Journal, 2020
Streptomyces are a large and valuable resource of bioactive and complex secondary metabolites, many of which have important clinical applications. With the advances in high throughput genome sequencing methods, various in silico genome mining strategies ...
Suhyung Cho   +2 more
exaly   +3 more sources

Heavy Tools for Genome Mining

open access: yesChemistry & Biology, 2007
In this issue of Chemistry & Biology, Gross et al. report development of a novel genome mining method for isolating products of orphan biosynthetic gene clusters, and the application of this method to the isolation of orfamide A, a novel cyclic lipopeptide.
Corre, Christophe, Challis, Gregory L.
openaire   +3 more sources

Automated genome mining for natural products [PDF]

open access: yesBMC Bioinformatics, 2009
Background Discovery of new medicinal agents from natural sources has largely been an adventitious process based on screening of plant and microbial extracts combined with bioassay-guided identification and natural product structure elucidation ...
Zajkowski James   +4 more
doaj   +5 more sources

Data Mining in Genomics [PDF]

open access: yesClinics in Laboratory Medicine, 2008
This article reviews important emerging statistical concepts, data mining techniques, and applications that have been recently developed and used for genomic data analysis. First, general background and some critical issues in genomic data mining are summarized.
Jae K, Lee   +2 more
openaire   +2 more sources

Genome mining for methanobactins [PDF]

open access: yesBMC Biology, 2013
Methanobactins (Mbns) are a family of copper-binding natural products involved in copper uptake by methanotrophic bacteria. The few Mbns that have been structurally characterized feature copper coordination by two nitrogen-containing heterocycles next to thioamide groups embedded in a peptidic backbone of varying composition.
Kenney, Grace E, Rosenzweig, Amy C
openaire   +2 more sources

AcaFinder: Genome Mining for Anti-CRISPR-Associated Genes

open access: yesmSystems, 2022
Anti-CRISPR (Acr) proteins are encoded by (pro)viruses to inhibit their host’s CRISPR-Cas systems. Genes encoding Acr and Aca (Acr associated) proteins often colocalize to form acr-aca operons.
Bowen Yang, Jinfang Zheng, Yanbin Yin
doaj   +1 more source

DGIdb: mining the druggable genome [PDF]

open access: yesNature Methods, 2013
The Drug-Gene Interaction database (DGIdb) mines existing resources that generate hypotheses about how mutated genes might be targeted therapeutically or prioritized for drug development. It provides an interface for searching lists of genes against a compendium of drug-gene interactions and potentially 'druggable' genes. DGIdb can be accessed at http:/
Malachi Griffith   +22 more
openaire   +2 more sources

Genomic and Metabolite Profiling Reveal a Novel Streptomyces Strain, QHH-9511, from the Qinghai-Tibet Plateau

open access: yesMicrobiology Spectrum, 2023
The prevalence of superbugs, represented by methicillin-resistant Staphylococcus aureus (MRSA), has become a serious clinical and public safety concern with rising incidence in hospitals.
Xi-Long Feng   +11 more
doaj   +1 more source

Effect of surface grain boundary density on preosteoblast proliferation on titanium

open access: yesMaterials Research Letters, 2020
Studies since 2004 have shown that the cytocompatibility of ultrafine grain (UG) commercial purity (CP) titanium exceeds that of coarse grain (CG) CP titanium (Ti) by 30% to 20-fold.
Terry C. Lowe   +5 more
doaj   +1 more source

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