Results 21 to 30 of about 1,940,445 (217)

Genomic Based Analysis of the Biocontrol Species Trichoderma harzianum: A Model Resource of Structurally Diverse Pharmaceuticals and Biopesticides

open access: yesJournal of Fungi, 2023
Fungi represents a rich repository of taxonomically restricted, yet chemically diverse, secondary metabolites that are synthesised via specific metabolic pathways.
Suhad A. A. Al-Salihi, Fabrizio Alberti
doaj   +1 more source

Resistance gene–guided genome mining reveals the roseopurpurins as inhibitors of cyclin-dependent kinases

open access: yesProceedings of the National Academy of Sciences of the United States of America, 2023
Significance Resistance gene–guided genome mining presents a solution to a longstanding challenge in natural product drug discovery by allowing the prediction of a natural product’s molecular target directly from the sequence of the gene cluster ...
Kyle L Dunbar   +11 more
semanticscholar   +1 more source

Comparative Genomics Analysis of Keratin-Degrading Chryseobacterium Species Reveals Their Keratinolytic Potential for Secondary Metabolite Production

open access: yesMicroorganisms, 2021
A promising keratin-degrading strain from the genus Chryseobacterium (Chryseobacterium sp. KMC2) was investigated using comparative genomic tools against three publicly available reference genomes to reveal the keratinolytic potential for biosynthesis of
Dingrong Kang   +4 more
doaj   +1 more source

FunARTS, the Fungal bioActive compound Resistant Target Seeker, an exploration engine for target-directed genome mining in fungi

open access: yesNucleic Acids Res., 2023
There is an urgent need to diversify the pipeline for discovering novel natural products due to the increase in multi-drug resistant infections. Like bacteria, fungi also produce secondary metabolites that have potent bioactivity and rich chemical ...
Turgut Mesut Yılmaz   +3 more
semanticscholar   +1 more source

Underexplored bacteria as reservoirs of novel antimicrobial lipopeptides

open access: yesFrontiers in Chemistry, 2022
Natural products derived from microorganisms play a prominent role in drug discovery as potential anti-infective agents. Over the past few decades, lipopeptides produced by particularly Bacillus, Pseudomonas, Streptomyces, Paenibacillus, and ...
Tanya Clements-Decker   +3 more
doaj   +1 more source

Genome mining reveals novel biosynthetic gene clusters in entomopathogenic bacteria

open access: yesScientific Reports, 2023
The discovery of novel bioactive compounds produced by microorganisms holds significant potential for the development of therapeutics and agrochemicals.
Wipanee Meesil   +9 more
semanticscholar   +1 more source

Pacificimonas pallium sp. nov., an Isolated Bacterium from the Mantle of Pacific Oyster Crassostrea gigas in Germany, and Prediction of One-Carbon Metabolism

open access: yesDiversity, 2022
A yellow bacterium from marine agar, strain WHA3T, was isolated from the mantel of the Pacific oysters Crassostrea gigas in the Wilhelmshaven Sea in northern Germany.
Hani Pira   +4 more
doaj   +1 more source

The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest

open access: yesNucleic Acids Res., 2022
Much of the complexity within cells arises from functional and regulatory interactions among proteins. The core of these interactions is increasingly known, but novel interactions continue to be discovered, and the information remains scattered across ...
Damian Szklarczyk   +12 more
semanticscholar   +1 more source

antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline

open access: yesNucleic Acids Res., 2019
Secondary metabolites produced by bacteria and fungi are an important source of antimicrobials and other bioactive compounds. In recent years, genome mining has seen broad applications in identifying and characterizing new compounds as well as in ...
K. Blin   +7 more
semanticscholar   +1 more source

Genome mining methods to discover bioactive natural products

open access: yesNatural product reports (Print), 2021
Covering: 2016 to 2021 With genetic information available for hundreds of thousands of organisms in publicly accessible databases, scientists have an unprecedented opportunity to meticulously survey the diversity and inner workings of life.
Katherine D. Bauman   +3 more
semanticscholar   +1 more source

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