Results 41 to 50 of about 1,988,937 (263)

e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences [PDF]

, 2004
Krüger J, Sczyrba A, Kurtz S, Giegerich R. e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences. NUCLEIC ACIDS RESEARCH.
Krüger, Jan, Sczyrba, Alexander ; https://orcid.org/, Giegerich, Robert, Kurtz, Stefan   +3 more
core   +1 more source

Translating genomics into risk prediction [PDF]

Thorax, 2017
Cigarette smoking is a leading risk factor in the development of cardiovascular, pulmonary and malignant diseases worldwide.1 Yet, it remains one of the most challenging environmental exposures to quantify. Rudimentary categorisations of ‘never’, ‘former’ and ‘current’ smoker capture only a fraction of the complexity associated with the exposure ...
Emily S, Wan, Dawn L, DeMeo
openaire   +2 more sources

Use of biological priors enhances understanding of genetic architecture and genomic prediction of complex traits within and between dairy cattle breeds

BMC Genomics, 2017
Background A better understanding of the genetic architecture underlying complex traits (e.g., the distribution of causal variants and their effects) may aid in the genomic prediction.
Lingzhao Fang, Goutam Sahana, Peipei Ma, Guosheng Su, Ying Yu, Shengli Zhang, Mogens Sandø Lund, Peter Sørensen   +7 more
doaj   +1 more source

GVCHAP: A Computing Pipeline for Genomic Prediction and Variance Component Estimation Using Haplotypes and SNP Markers

Frontiers in Genetics, 2020
Haplotype prediction models open many possibilities to improve the accuracy of genomic selection but require more data processing and computing time than single-SNP prediction models. To facilitate haplotype analysis for genomic prediction and estimation
Dzianis Prakapenka, Chunkao Wang, Zuoxiang Liang, Cheng Bian, Cheng Bian, Cheng Tan, Cheng Tan, Yang Da   +7 more
doaj   +1 more source

Fast and sensitive multiple alignment of large genomic sequences [PDF]

, 2003
Brudno M, Chapman M, Göttgens B, Batzoglou S, Morgenstern B. Fast and sensitive multiple alignment of large genomic sequences. BMC Bioinformatics.
Brudno, Michael, Batzoglou, S., Chapman, Mark A., Göttgens, Berthold, Batzoglou, Serafim, Morgenstern, Burkhard, Gottgens, B., Chapman, Michael, Berthold Göttgens, Brudno, M., Burkhard Morgenstern, Michael Chapman, Michael Brudno, Serafim Batzoglou   +13 more
core   +3 more sources

Functional QTL mapping and genomic prediction of canopy height in wheat measured using a robotic field phenotyping platform [PDF]

, 2020
Genetic studies increasingly rely on high-throughput phenotyping, but the resulting longitudinal data pose analytical challenges. We used canopy height data from an automated field phenotyping platform to compare several approaches to scanning for ...
Orford, S., Simon Griffiths, Luzie U Wingen, Malcolm J Hawkesford, Virlet, N., Nicolas Virlet, Hassall, K. L., Wingen, L. U., Lyra, D. H., Slavov, G., Simon Orford, Sadeghi-Tehran, P., Griffiths, S., Gancho T Slavov, Pouria Sadeghi-Tehran, Danilo H Lyra, Hawkesford, M. J., Kirsty L Hassall   +17 more
core   +1 more source

Sequencing data: A genomic network to monitor Earth

, 2012
We propose that a network of genomic observatories should be established to take the planet's 'biological pulse'. We invite participants to assist in the shaping of this network (see genomicobservatories.org).
Field, D., The Genomic Observatories Network, Neil Davies, Hirsch, P. R., The Genomic Observatories Network, ., The Genomic Observatories Network,, Davies, N., Field, Dawn, Bates, N., Dawn Field, Davies, Neil   +10 more
core   +1 more source

Prosecutor: parameter-free inference of gene function for prokaryotes using DNA microarray data, genomic context and multiple gene annotation sources [PDF]

, 2008
Background: Despite a plethora of functional genomic efforts, the function of many genes in sequenced genomes remains unknown. The increasing amount of microarray data for many species allows employing the guilt-by-association principle to predict ...
Hofstede, K.J., Oscar P Kuipers, Hijum, Sacha A.F.T. van,, Breitling, Rainer, Blom, E.J., Breitling, R., Breitling, Rainer,, Blom Evert, Roerdink, J.B.T.M., Hofstede Klaas, Breitling Rainer, Jos BTM Roerdink, Blom, Evert Jan, Klaas Hofstede, Roerdink, J.B.T.M.; id_orcid, Kuipers, Oscar P.,, van Hijum, S.A F T, Kuipers, O.P., Hofstede, Klaas Jan,, Roerdink, Jos B T M, van Hijum Sacha AFT, Roerdink Jos BTM, Kuipers, Oscar P., Rainer Breitling, van Hijum, S.A.F.T., Kuipers Oscar P, Hofstede, Klaas Jan, van Hijum, Sacha A F T, Blom, Evert Jan,, Sacha AFT van Hijum, Roerdink, Jos B.T.M.,, Evert Blom, Kuipers, O.P.; id_orcid   +32 more
core   +2 more sources

The Dimensionality of Genomic Information and Its Effect on Genomic Prediction [PDF]

Genetics, 2016
Abstract The genomic relationship matrix (GRM) can be inverted by the algorithm for proven and young (APY) based on recursion on a random subset of animals. While a regular inverse has a cubic cost, the cost of the APY inverse can be close to linear.
Pocrnic, Ivan, Lourenco, Daniela a L, Masuda, Yutaka, Legarra, Andres, Misztal, Ignacy   +4 more
openaire   +5 more sources

Comparison of analyses of the QTLMAS XIII common dataset. I: genomic selection [PDF]

, 2010
Background - Genomic selection, the use of markers across the whole genome, receives increasing amounts of attention and is having more and more impact on breeding programs. Development of statistical and computational methods to estimate breeding values
Coster, A., Albart Coster, Bastiaansen, J.W.M., Bink, M.C.A.M., Chris Maliepaard, Mario Calus, Calus, M.P.L., John Bastiaansen, John W M Bastiaansen, Marco C A M Bink, Marco Bink, Mario P L Calus, Maliepaard, C.A.   +12 more
core   +1 more source