Results 51 to 60 of about 2,453,732 (306)

Genomic datasets utilised in the helminth AMP prediction approach.

, 2023
Genomic datasets utilised in the helminth AMP prediction approach.
Louise E. Atkinson (9235356), Sharon A. Huws (8777711), Darrin Mckenzie (12984359), Robert L. J. Graham (16715594), Allister Irvine (11232111), Ciaran J. McCoy (8668806), Ciaren Graham (323732), Angela Mousley (218342)   +7 more
core   +1 more source

Sequencing data: A genomic network to monitor Earth

, 2012
We propose that a network of genomic observatories should be established to take the planet's 'biological pulse'. We invite participants to assist in the shaping of this network (see genomicobservatories.org).
Field, D., The Genomic Observatories Network, Neil Davies, Hirsch, P. R., The Genomic Observatories Network, ., Davies, N., Field, Dawn, Bates, N., Dawn Field, Davies, Neil, Hirsch, Penny   +10 more
core   +1 more source

Prosecutor: parameter-free inference of gene function for prokaryotes using DNA microarray data, genomic context and multiple gene annotation sources [PDF]

, 2008
Background: Despite a plethora of functional genomic efforts, the function of many genes in sequenced genomes remains unknown. The increasing amount of microarray data for many species allows employing the guilt-by-association principle to predict ...
Hofstede, K.J., Oscar P Kuipers, Breitling, Rainer, Blom, E.J., Breitling, R., Blom Evert, Roerdink, J.B.T.M., Hofstede Klaas, Breitling Rainer, Jos BTM Roerdink, Blom, Evert Jan, Klaas Hofstede, Roerdink, J.B.T.M.; id_orcid, van Hijum, S.A F T, Kuipers, O.P., Roerdink, Jos B T M, van Hijum Sacha AFT, Roerdink Jos BTM, Kuipers, Oscar P., Rainer Breitling, van Hijum, S.A.F.T., Kuipers Oscar P, Hofstede, Klaas Jan, van Hijum, Sacha A F T, Sacha AFT van Hijum, Evert Blom, Kuipers, O.P.; id_orcid, Breitling, Rainer; id_orcid   +27 more
core   +1 more source

Exploring the genetic architecture and improving genomic prediction accuracy for mastitis and milk production traits in dairy cattle by mapping variants to hepatic transcriptomic regions responsive to intra-mammary infection

Genetics Selection Evolution, 2017
Background A better understanding of the genetic architecture of complex traits can contribute to improve genomic prediction. We hypothesized that genomic variants associated with mastitis and milk production traits in dairy cattle are enriched in ...
Lingzhao Fang, Goutam Sahana, Peipei Ma, Guosheng Su, Ying Yu, Shengli Zhang, Mogens Sandø Lund, Peter Sørensen   +7 more
doaj   +1 more source

Accuracy of multi-trait genomic selection using different methods [PDF]

, 2011
Background Genomic selection has become a very important tool in animal genetics and is rapidly emerging in plant genetics. It holds the promise to be particularly beneficial to select for traits that are difficult or expensive to measure, such as traits
Veerkamp Roel F, Calus, M.P.L., Roel F Veerkamp, Calus Mario PL, Veerkamp, R.F., Mario PL Calus   +5 more
core   +1 more source

Investigating transcription factor dynamics in health and disease using FRAP

FEBS Letters, EarlyView.
FRAP analysis of GFP‐tagged transcription factors reveals how molecular mobility and target engagement change in response to drug treatment. By combining live‐cell imaging, quantitative model fitting, and statistical analysis, this approach uncovers transcription factor dynamics linked to disease mechanisms, providing a powerful framework for ...
Kannan Govindaraj, Carolina Vazquez Garzon, Jose Joaquin Velasco, Janine N. Post   +3 more
wiley   +1 more source

Comparison of Single-Trait and Multi-Trait GBLUP Models for Genomic Prediction in Red Clover

Agronomy
Red clover (Trifolium pratense) is a perennial forage legume wildly used in temperate regions, including northern Europe. Its breeders are under increasing pressure to obtain rapid genetic gains to meet the high demand for improved forage yield and ...
Johanna Osterman, Lucia Gutiérrez, Linda Öhlund, Rodomiro Ortiz, Cecilia Hammenhag, David Parsons, Mulatu Geleta   +6 more
doaj   +1 more source

Estimation of genomic prediction accuracy from reference populations with varying degrees of relationship. [PDF]

PLoS ONE, 2017
Genomic prediction is emerging in a wide range of fields including animal and plant breeding, risk prediction in human precision medicine and forensic.
S Hong Lee, Sam Clark, Julius H J van der Werf   +2 more
doaj   +1 more source

Comparison of analyses of the QTLMAS XIV common dataset. I: genomic selection [PDF]

, 2011
Background - For the XIV QTLMAS workshop, a dataset for traits with complex genetic architecture has been simulated and released for analyses by participants. One of the tasks was to estimate direct genomic values for individuals without phenotypes.
Tomasz Strabel, Pszczola, M.J., Sebastian Mucha, Mucha, S., Marcin Pszczola, Strabel, T., Wolc, A., Szydlowski, M., Anna Wolc, Maciej Szydlowski, Szydlowski Maciej, Pszczola Marcin, Wolc Anna, Strabel Tomasz, Mucha Sebastian   +14 more
core   +1 more source

Datasets to test the importance of genetic architecture in marker selection decisions for genomic prediction

, 2023
Files include structural variant calls of the maize parental lines, genotypic data for recombinant inbred lines (RILs), simulated trait values for each RIL with different genetic architectures, input data for genomic prediction models with different ...
Hirsch, Candice N, Monnahan, Patrick J, Mikel, Mark A, Della Coletta, Rafael, Fernandes, Samuel B, Bohn, Martin O, Lipka, Alexander E   +6 more
core   +1 more source