Results 41 to 50 of about 150,001 (296)

The evolution, molecular epidemiology and genomic sampling of emerging viruses [PDF]

, 2023
Emerging viruses represent a challenging threat to global health. Increasing human travel and global connectivity, changing climate patterns and incremental contact rates between human and animal populations contribute to the likelihood of emerging viral
Gutierrez Granja, Bernardo Miguel
core   +2 more sources

Comparative Gut Microbiome in Trachypithecus leucocephalus and Other Primates in Guangxi, China, Based on Metagenome Sequencing

Frontiers in Cellular and Infection Microbiology, 2022
The Trachypithecus leucocephalus (white-headed langur) is a highly endangered, karst-endemic primate species, inhabiting the karst limestone forest in Guangxi, Southwest China.
Tengcheng Que, Xianwu Pang, Xianwu Pang, Hongli Huang, Panyu Chen, Yinfeng Wei, Yiming Hua, Hongjun Liao, Jianbao Wu, Shousheng Li, Aiqiong Wu, Meihong He, Xiangdong Ruan, Yanling Hu, Yanling Hu   +14 more
doaj   +1 more source

Strengthening pathogen genomic surveillance for health emergencies: insights from the World Health Organization’s regional initiatives

Frontiers in Public Health, 2023
The onset of the COVID-19 pandemic triggered a rapid scale-up in the use of genomic surveillance as a pandemic preparedness and response tool. As a result, the number of countries with in-country SARS-CoV-2 genomic sequencing capability increased by 40 ...
Oluwatosin Wuraola Akande, Lisa L. Carter, Abdinasir Abubakar, Rachel Achilla, Amal Barakat, Nicksy Gumede, Alina Guseinova, Francis Yesurajan Inbanathan, Masaya Kato, Etien Koua, Juliana Leite, Marco Marklewitz, Jairo Mendez-Rico, Chavely Monamele, Biran Musul, Karen Nahapetyan, Dhamari Naidoo, Rachel Ochola, Mehmet Ozel, Philomena Raftery, Andrea Vicari, Pushpa Ranjan Wijesinghe, Joanna Zwetyenga, Kelly Safreed-Harmon, Céline Barnadas, Mick Mulders, Dmitriy I. Pereyaslov, Jilian A. Sacks, Taylor Warren, Sébastien Cognat, Sylvie Briand, Gina Samaan   +31 more
doaj   +1 more source

CLIMB-COVID: continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance

Genome Biology, 2021
In response to the ongoing SARS-CoV-2 pandemic in the UK, the COVID-19 Genomics UK (COG-UK) consortium was formed to rapidly sequence SARS-CoV-2 genomes as part of a national-scale genomic surveillance strategy.
Samuel M. Nicholls, Radoslaw Poplawski, Matthew J. Bull, Anthony Underwood, Michael Chapman, Khalil Abu-Dahab, Ben Taylor, Rachel M. Colquhoun, Will P. M. Rowe, Ben Jackson, Verity Hill, Áine O’Toole, Sara Rey, Joel Southgate, Roberto Amato, Rich Livett, Sónia Gonçalves, Ewan M. Harrison, Sharon J. Peacock, David M. Aanensen, Andrew Rambaut, Thomas R. Connor, Nicholas J. Loman, The COVID-19 Genomics UK (COG-UK) Consortium   +23 more
doaj   +1 more source

Genomic-wide analysis approach revealed genomic similarity for environmental Mexican S. Oranienburg genomes [PDF]

, 2023
As the human population grows, an increase in food trade is needed. This elevates the risk of epidemiological outbreaks. One of the prevalent pathogens associated with food production in Mexico has been Salmonella Oranienburg.
N. Castro Del Campo (14826932), I. F. Vega-Lopez (14826929), J. Martínez-Urtaza (14826938), J. A. medrano-Felix (14826935), J. R. Aguirre-Sanchez (14826926), C. Chaidez-Quiroz (14826941)   +5 more
core   +1 more source

High Genetic Diversity of Carbapenem-Resistant Acinetobacter baumannii Isolates Recovered in Nigerian Hospitals in 2016 to 2020

mSphere, 2023
Acinetobacter baumannii causes difficult-to-treat infections mostly among immunocompromised patients. Clinically relevant A. baumannii lineages and their carbapenem resistance mechanisms are sparsely described in Nigeria. This study aimed to characterize
Erkison Ewomazino Odih, Anderson O. Oaikhena, Anthony Underwood, Yaovi Mahuton Gildas Hounmanou, Oyinlola O. Oduyebo, Abayomi Fadeyi, Aaron O. Aboderin, Veronica O. Ogunleye, Silvia Argimón, Vitus Nnaemeka Akpunonu, Phillip O. Oshun, Abiodun Egwuenu, Tochi J. Okwor, Chikwe Ihekweazu, David M. Aanensen, Anders Dalsgaard, Iruka N. Okeke   +16 more
doaj   +1 more source

Genomic surveillance and pathogen intelligence

Frontiers in Science
David M. Engelthaler
doaj   +2 more sources

Genomic Diversity among Beijing and non-Beijing Mycobacterium tuberculosis Isolates from Myanmar [PDF]

, 2008
Background: The Beijing family of Mycobacterium tuberculosis is dominant in countries in East Asia. Genomic polymorphisms are a source of diversity within the M. tuberculosis genome and may account for the variation of virulence among M.
Hinds Jason, Grewal, HM, Butcher, PD, Stavrum Ruth, Stavrum, R, Bø, TH, Ruth Stavrum, Valvatne, H, Trond H Bø, Jonassen, I, Philip D Butcher, Valvatne Håvard, Bø Trond H., Hinds, J, Butcher Philip D., Jonassen Inge, Inge Jonassen, Jason Hinds, Håvard Valvatne, Harleen M S Grewal, Grewal Harleen M. S.   +20 more
core   +1 more source

Understanding the global rise of artemisinin resistance: Insights from over 100,000 Plasmodium falciparum samples

eLife
Artemisinin partial resistance (ART-R) in Plasmodium falciparum is a major challenge to malaria control globally. Over the last two decades, ART-R has spread widely across Southeast Asia, undermining public health strategies and hindering elimination. As
Andrew J Balmer, Nina FD White, Eyyüb S Ünlü, Chiyun Lee, Richard D Pearson, Jacob Almagro-Garcia, Cristina Ariani   +6 more
doaj   +1 more source

Genomic surveillance of COVID-19 cases in Beijing [PDF]

Nature Communications, 2020
AbstractThe spread of SARS-CoV-2 in Beijing before May, 2020 resulted from transmission following both domestic and global importation of cases. Here we present genomic surveillance data on 102 imported cases, which account for 17.2% of the total cases in Beijing.
Du, Pengcheng, Ding, Nan, Li, Jiarui, Zhang, Fujie, Wang, Qi, Chen, Zhihai, Song, Chuan, Han, Kai, Xie, Wen, Liu, Jingyuan, Wang, Linghang, Wei, Lirong, Ma, Shanfang, Hua, Mingxi, Yu, Fengting, Wang, Lin, Wang, Wei, An, Kang, Chen, Jianjun, Liu, Haizhou, Gao, Guiju, Wang, Sa, Huang, Yanyi, Wu, Angela R., Wang, Jianbin, Liu, Di, Zeng, Hui, Chen, Chen   +27 more
openaire   +4 more sources