Results 21 to 30 of about 150,001 (296)

Europe-wide expansion and eradication of multidrug-resistant Neisseria gonorrhoeae lineages: a genomic surveillance study [PDF]

, 2022
Background: Genomic surveillance using quality-assured whole-genome sequencing (WGS) together with epidemiological and antimicrobial resistance (AMR) data is essential to characterise the circulating Neisseria gonorrhoeae lineages and their association ...
Sajedi, Noshin, Yeats, Corin A, Spiteri, Gianfranco, Underwood, Anthony,, Jacobsson, Susanne,, Day, Michaela, Euro-GASP study group, Bluemel, Benjamin,, Underwood, Anthony, Cole, Michelle J, Aanensen, David M, Centre for Genomic Pathogen Surveillance, Yeats, Corin A.,, Centre for Genomic Pathogen Surveillance and the Euro-GASP study group, Abad, Raquel, Aanensen, David M.,, Abudahab, Khalil,, Golparian, Daniel, Cole, Michelle J.,, Abudahab, Khalil, Diaz Franco, Asuncion, Sánchez-Busó, Leonor, Sánchez-Busó, Leonor,, Golparian, Daniel,, Unemo, Magnus, Jacobsson, Susanne, Sajedi, Noshin,, Day, Michaela,, Unemo, Magnus,, Vazquez-Moreno, Julio Alberto, Bluemel, Benjamin, Spiteri, Gianfranco,   +31 more
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Enhancing SARS-CoV-2 Surveillance through Regular Genomic Sequencing in Spain: The RELECOV Network [PDF]

, 2023
2023 Descuentos MDPIMillions of SARS-CoV-2 whole genome sequences have been generated to date. However, good quality data and adequate surveillance systems are required to contribute to meaningful surveillance in public health.
Vázquez Morón, Sonia, Folgueira López, María Dolores, Casas, Inmaculada   +2 more
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Genomic surveillance of Pseudomonas aeruginosa in the Philippines, 2013-2014

Western Pacific Surveillance and Response, 2021
Pseudomonas aeruginosa is an opportunistic pathogen that often causes nosocomial infections resistant to treatment. Rates of antimicrobial resistance (AMR) are increasing, as are rates of multidrug-resistant (MDR) and possible extensively drug-resistant (
Jeremiah Chilam, Silvia Argimon, Marilyn T. Limas, Melissa L. Masim, June M. Gayeta, Marietta L. Lagrada, Agnettah M. Olorosa, Victoria Cohen, Lara T. Hernandez, Benjamin Jeffrey, Khalil Abudahab, Charmian M. Hufano, Sonia B. Sia, Matthew T.G. Holden, John Stelling, David M. Aanensen, Celia C. Carlos   +16 more
doaj   +1 more source

anopheles-genomic-surveillance/selection-atlas: v0.0.1-beta [PDF]

, 2023
<p>Creating a citable first release for the AnoExpress paper.</p ...
Sanjay Curtis Nagi, Alistair Miles
core   +1 more source

The Viromes of Mosquitoes from the Natural Landscapes of Western Siberia

Viruses, 2023
The metagenomic analysis of mosquitoes allows for the genetic characterization of mosquito-associated viruses in different regions of the world. This study applied a metagenomic approach to identify novel viral sequences in seven species of mosquitoes ...
Vladimir A. Ternovoi, Alexander N. Shvalov, Mikhail Yu. Kartashov, Eugenia P. Ponomareva, Natalia L. Tupota, Yuri A. Khoroshavin, Roman B. Bayandin, Anastasia V. Gladysheva, Tamara P. Mikryukova, Tatyana V. Tregubchak, Valery B. Loktev   +10 more
doaj   +1 more source

Genomic surveillance reveals antibiotic resistance gene transmission via phage recombinases within sheep mastitis-associated Streptococcus uberis [PDF]

, 2022
BACKGROUND: Streptococcus uberis is one of the main causative agents of ovine mastitis, however little is known about this global, environmental pathogen and its genomic mechanisms of disease. In this study, we performed genomic analysis on 46 S.
Rosa, Maria Nives, Vezina, Ben, Tola, Sebastiana, Canu, Antonella   +3 more
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Novel multidrug-resistant sublineages of Staphylococcus aureus clonal complex 22 discovered in India

mSphere, 2023
Staphylococcus aureus is a major pathogen in India causing community and nosocomial infections, but little is known about its molecular epidemiology and mechanisms of resistance in hospital settings.
Monica I. Abrudan, Varun Shamanna, Akshatha Prasanna, Anthony Underwood, Silvia Argimón, Geetha Nagaraj, Sabrina Di Gregorio, Vandana Govindan, Ashwini Vasanth, Sravani Dharmavaram, Mihir Kekre, David M. Aanensen, K. L. Ravikumar   +12 more
doaj   +1 more source

Rectal Colonization and Nosocomial Transmission of Carbapenem-Resistant Acinetobacter baumannii in an Intensive Care Unit, Southwest Nigeria

Frontiers in Medicine, 2022
BackgroundAcinetobacter baumannii are of major human health importance because they cause life-threatening nosocomial infections and often are highly resistant to antimicrobials. Specific multidrug-resistant A.
Erkison Ewomazino Odih, Erkison Ewomazino Odih, Emmanuel Oladayo Irek, Temitope O. Obadare, Anderson O. Oaikhena, Ayorinde O. Afolayan, Anthony Underwood, Anthony Underwood, Anthony T. Adenekan, Veronica O. Ogunleye, Silvia Argimon, Silvia Argimon, Anders Dalsgaard, David M. Aanensen, David M. Aanensen, Iruka N. Okeke, A. Oladipo Aboderin   +16 more
doaj   +1 more source

Overcoming data bottlenecks in pathogen genomic surveillance [PDF]

, 2020
Training materials associated with the NIHR Global Health Research Unit, Genomic Surveillance of Antimicrobial Resistance and published in the paper "Overcoming data bottlenecks in pathogen genomic surveillance". Clinical Infectious DiseasesThis work was
Argimon, Silvia, Kumar, Ravi, Donado-Godoy, Pilar, Gayeta, June, Underwood, Anthony, Sia, Sonia, Shammana, Varun, Okeke, Iruka, Aanensen, David M., Masim, Melissa Ana, Abrudan, Monica, Bernal, Johan F., Afolayan, Ayorinde, Carlos, Celia   +13 more
core   +1 more source

Field and classroom initiatives for portable sequence-based monitoring of dengue virus in Brazil [PDF]

, 2021
Funding Information: mented an arbovirus surveillance project that took place across the Midwest of Brazil using a mobile genomics laboratory (Supplementary Fig. 9).
Pimentel, Victor, Latin American Genomic Surveillance Arboviral Network   +1 more
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