Evolution of short inverted repeat in cupressophytes, transfer of accD to nucleus in Sciadopitys verticillata and phylogenetic position of Sciadopityaceae [PDF]
Scientific Reports, 2016 Sciadopitys verticillata is an evergreen conifer and an economically valuable tree used in construction, which is the only member of the family Sciadopityaceae. Acquisition of the S.
Jia Li +5 more
semanticscholar +2 more sources
Temporal changes in transcripts of miniature inverted-repeat transposable elements during rice endosperm development. [PDF]
Plant J, 2022 Nagata H +7 more
europepmc +2 more sources
Plastid genomes of the North American Rhus integrifolia-ovata complex and phylogenomic implications of inverted repeat structural evolution in Rhus L. [PDF]
PeerJ, 2020 Plastid genomes (plastomes) represent rich sources of information for phylogenomics, from higher-level studies to below the species level. The genus Rhus (sumac) has received a significant amount of study from phylogenetic and biogeographic perspectives,
Craig F. Barrett
doaj +3 more sources
Concentration of inverted repeats along human DNA
Journal of Integrative Bioinformatics, 2023 This work aims to describe the observed enrichment of inverted repeats in the human genome; and to identify and describe, with detailed length profiles, the regions with significant and relevant enriched occurrence of inverted repeats.
Bastos Carlos A. C. +3 more
doaj +4 more sources
Unexpected invasion of miniature inverted-repeat transposable elements in viral genomes
Mobile DNA, 2018 Background Transposable elements (TEs) are common and often present with high copy numbers in cellular genomes. Unlike in cellular organisms, TEs were previously thought to be either rare or absent in viruses.
Hua-Hao Zhang +21 more
doaj +2 more sources
A study on genomic distribution and sequence features of human long inverted repeats reveals species‐specific intronic inverted repeats [PDF]
The FEBS Journal, 2009 The inverted repeats present in a genome play dual roles. They can induce genomic instability and, on the other hand, regulate gene expression. In the present study, we report the distribution and sequence features of recombinogenic long inverted repeats (LIRs) that are capable of forming stable stem‐loops or palindromes within the human genome.
Wang, Y, Leung, FCC
openaire +6 more sources
Polymorphic insertions of DcSto miniature inverted-repeat transposable elements reveal genetic diversity structure within the cultivated carrot. [PDF]
J Appl GenetHadagali S +4 more
europepmc +3 more sources
Inverted Repeats in Viral Genomes
bioRxivAbstract An inverted repeat (IR) in DNA is a sequence of nucleotides that is followed by its complementary bases but in reverse order, occurring on the same strand (e.g., TCACCGCGGTGA). If the two complementary sequences occur one after the other without other bases between them, they are referred to as DNA palindromes.
Madhura Sen +4 more
semanticscholar +2 more sources
The Plant Journal, 2021 The plastid genome (plastome), while surprisingly constant in gene order and content across most photosynthetic angiosperms, exhibits variability in several unrelated lineages.
Chaehee Lee +7 more
semanticscholar +1 more source
Evidence for active maintenance of inverted repeat structures identified by a comparative genomic approach. [PDF]
PLoS ONE, 2007 Inverted repeats have been found to occur in both prokaryotic and eukaryotic genomes. Usually they are short and some have important functions in various biological processes.
Guoyan Zhao +3 more
doaj +1 more source