Results 1 to 10 of about 6,310,708 (325)

Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities. [PDF]

mSystems, 2021
Microbiome samples are inherently defined by the environment in which they are found. Therefore, data that provide context and enable interpretation of measurements produced from biological samples, often referred to as metadata, are critical.
Vangay P, Burgin J, Johnston A, Beck KL, Berrios DC, Blumberg K, Canon S, Chain P, Chandonia JM, Christianson D, Costes SV, Damerow J, Duncan WD, Dundore-Arias JP, Fagnan K, Galazka JM, Gibbons SM, Hays D, Hervey J, Hu B, Hurwitz BL, Jaiswal P, Joachimiak MP, Kinkel L, Ladau J, Martin SL, McCue LA, Miller K, Mouncey N, Mungall C, Pafilis E, Reddy TBK, Richardson L, Roux S, Schriml LM, Shaffer JP, Sundaramurthi JC, Thompson LR, Timme RE, Zheng J, Wood-Charlson EM, Eloe-Fadrosh EA.   +41 more
europepmc   +2 more sources

COVID-19 pandemic reveals the peril of ignoring metadata standards. [PDF]

Sci Data, 2020
Efficient response to the pandemic through the mobilization of the larger scientific community is challenged by the limited reusability of the available primary genomic data.
Schriml LM, Chuvochina M, Davies N, Eloe-Fadrosh EA, Finn RD, Hugenholtz P, Hunter CI, Hurwitz BL, Kyrpides NC, Meyer F, Mizrachi IK, Sansone SA, Sutton G, Tighe S, Walls R.   +14 more
europepmc   +2 more sources

MAMS: matrix and analysis metadata standards to facilitate harmonization and reproducibility of single-cell data. [PDF]

Genome Biol
Many datasets are being produced by consortia that seek to characterize healthy and disease tissues at single-cell resolution. While biospecimen and experimental information is often captured, detailed metadata standards related to data matrices and ...
Sarfraz I, Wang Y, Shastry A, Teh WK, Sokolov A, Herb BR, Creasy HH, Virshup I, Dries R, Degatano K, Mahurkar A, Schnell DJ, Madrigal P, Hilton J, Gehlenborg N, Tickle T, Campbell JD.   +16 more
europepmc   +2 more sources

Building a Disciplinary Metadata Standards Directory

International Journal of Digital Curation, 2014
The Research Data Alliance (RDA) Metadata Standards Directory Working Group (MSDWG) is building a directory of descriptive, discipline-specific metadata standards.
Alexander Ball, Sean Chen, Jane Greenberg, Cristina Perez, Keith Jeffery, Rebecca Koskela   +5 more
doaj   +12 more sources

Mapping ISO 19115-1 geographic metadata standards to CodeMeta. [PDF]

PeerJ Comput Sci, 2019
The CodeMeta Project recently proposed a vocabulary for software metadata. ISO Technical Committee 211 has published a set of metadata standards for geographic data and many kinds of related resources, including software.
Habermann T.
europepmc   +2 more sources

FAIR Metadata Standards for Low Carbon Energy Research—A Review of Practices and How to Advance

Energies, 2021
The principles of Findability, Accessibility, Interoperability, and Reusability (FAIR) have been put forward to guide optimal sharing of data. The potential for industrial and social innovation is vast.
August Wierling, Valeria Jana Schwanitz, Sebnem Altinci, Maria Bałazińska, Michael J. Barber, Mehmet Efe Biresselioglu, Christopher Burger-Scheidlin, Massimo Celino, Muhittin Hakan Demir, Richard Dennis, Nicolas Dintzner, Adel el Gammal, Carlos M. Fernández-Peruchena, Winston Gilcrease, Paweł Gładysz, Carsten Hoyer-Klick, Kevin Joshi, Mariusz Kruczek, David Lacroix, Małgorzata Markowska, Rafael Mayo-García, Robbie Morrison, Manfred Paier, Giuseppe Peronato, Mahendranath Ramakrishnan, Janeita Reid, Alessandro Sciullo, Berfu Solak, Demet Suna, Wolfgang Süß, Astrid Unger, Maria Luisa Fernandez Vanoni, Nikola Vasiljevic   +32 more
doaj   +2 more sources

FAANG, establishing metadata standards, validation and best practices for the farmed and companion animal community. [PDF]

Anim Genet, 2018
Summary The Functional Annotation of ANimal Genomes (FAANG) project aims, through a coordinated international effort, to provide high quality functional annotation of animal genomes with an initial focus on farmed and companion animals. A key goal of the
Harrison PW, Fan J, Richardson D, Clarke L, Zerbino D, Cochrane G, Archibald AL, Schmidt CJ, Flicek P.   +8 more
europepmc   +2 more sources

Modeling domain metadata beyond metadata standards [PDF]

iConference 2016 Proceedings, 2016
The Laser Interferometer Gravitational-wave Observatory (LIGO) project to detect gravitational waves represents a complex, distributed scientific endeavor posing specific challenges for reproducibility and data management.
Qin, Jian
core   +3 more sources

BioSharing: curated and crowd-sourced metadata standards, databases and data policies in the life sciences. [PDF]

Database (Oxford), 2016
BioSharing (http://www.biosharing.org) is a manually curated, searchable portal of three linked registries. These resources cover standards (terminologies, formats and models, and reporting guidelines), databases, and data policies in the life sciences ...
McQuilton P, Gonzalez-Beltran A, Rocca-Serra P, Thurston M, Lister A, Maguire E, Sansone SA.   +6 more
europepmc   +2 more sources

Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model. [PDF]

Nat Methods, 2021
Hammer M, Huisman M, Rigano A, Boehm U, Chambers JJ, Gaudreault N, North AJ, Pimentel JA, Sudar D, Bajcsy P, Brown CM, Corbett AD, Faklaris O, Lacoste J, Laude A, Nelson G, Nitschke R, Farzam F, Smith CS, Grunwald D, Strambio-De-Castillia C.   +20 more
europepmc   +2 more sources