Results 151 to 160 of about 503,920 (237)

Metagenome-assembled genome (MAG) information from Nome Creek, Alaska soils

, 2019
Information on 54 prokaryotic metagenome-assembled genome (MAG) sequences binned from a co-assembly of 12 soil samples from this wildfire impacted upland Alaskan boreal forest soils.
Neslihan Tas (6191723)
core   +1 more source

Does nutrient scarcity select for Synechococcus clade III in the Mediterranean Sea?

Limnology and Oceanography Letters, Volume 11, Issue 5, September 2026.
Abstract Synechococcus inhabit both nutrient‐rich estuaries and oligotrophic waters, yet exhibit distinct niche segregation across phylogenetic clades. Previous studies indicated clade III predominated in the ultraoligotrophic Mediterranean Sea. However, the mechanisms underlying clade III's dominance over other clades in ultraoligotrophic waters ...
Xiaodong Zhang, Shunyan Cheung, Hoi Yau Chan, Sangwook Scott Lee, Ioulia Santi, Paraskevi Pitta, Jiawei Chen, Hongbin Liu   +7 more
wiley   +1 more source

Metagenomic assembled dataset of potentially polyethylene terephthalate-degrading microcosms enriched from seawater, cow dung, and landfill soilNCBI SRA

Data in Brief
We present a dataset of 99 prokaryotic metagenome-assembled genomes (MAGs) derived from 180-day culture-enrichment microcosms of seawater, landfill soil, and cow dung, with polyethylene terephthalate (PET) as the sole carbon source.
Aubrey Dickon Chigwada, Henry Joseph Oduor Ogola, Memory Tekere   +2 more
doaj   +1 more source

Evolutionary insights into bilin biosynthesis: Functional characterization of pre‐PcyA enzymes

Protein Science, Volume 35, Issue 9, September 2026.
Abstract Biosynthesis of the linear tetrapyrrole phycocyanobilin (PCB) by the ferredoxin‐dependent bilin reductase (FDBR) PcyA is essential for light‐harvesting and regulatory processes in diverse photosynthetic organisms, yet its evolutionary origins are not fully understood. PcyA evolved from pre‐PcyA proteins found in diverse bacteria.
Federica Frascogna, Nathan C. Rockwell, Gunhild Layer, Nicole Frankenberg‐Dinkel   +3 more
wiley   +1 more source

iNAP 2.0: Harnessing metabolic complementarity in microbial network analysis

iMeta
With the widespread adoption of metagenomic sequencing, new perspectives have emerged for studying microbial ecological networks, yielding metabolic evidence of interspecies interactions that traditional co‐occurrence networks cannot infer. This protocol
Xi Peng, Kai Feng, Xingsheng Yang, Qing He, Bo Zhao, Tong Li, Shang Wang, Ye Deng   +7 more
doaj   +1 more source

The chromosomal genome sequence of the marine leech, Branchellion lobata Moore, 1952 and its associated microbial metagenome sequences [version 1; peer review: 1 approved, 2 approved with reservations]

Wellcome Open Research
We present a genome assembly from an individual Branchellion lobata (the marine leech; Annelida; Clitellata; Hirudinida; Piscicolidae). The genome sequence is 174.1 megabases in span. Most of the assembly is scaffolded into 17 chromosomal pseudomolecules.
Eerik Aunin, Ralph Appy, Shana K. Goffredi, Victoria McKenna, Elizabeth Sinclair, Graeme Oatley, Camilla Santos, Haoyu Niu, Noah Gettle, Michael Paulini, José M. Martín-Durán, Rebecca O’Brien   +11 more
doaj   +1 more source

Microbiome‐mediated chemical communication in insects: Implications for pest management

Pest Management Science, Volume 82, Issue 9, Page 8132-8151, September 2026.
Microbiome–semiochemical interactions involve the following processes: direct microbial synthesis, host gene regulation, precursor biotransformation, microbiome modulation and indirect ecological signaling. Abstract Insects rely on semiochemicals to regulate aggregation, mating, foraging, and host selection. This review synthesizes evidence that insect‐
Ioannis Eleftherianos, Wei Zhang, Amr Mohamed, Rasha K. Al‐Akeel, Abeer M. Alkhaibari, Nemat Keyhani, Guy Smagghe   +6 more
wiley   +1 more source

Nitrogen‐Starved Wheat: A Multi‐Omics Perspective From Epigenome Regulation to Grain Quality

Journal of Sustainable Agriculture and Environment, Volume 5, Issue 3, September 2026.
This review establishes epigenetic regulation, specifically H3K27ac and H3K27me3 dynamics at nitrogen transporter, assimilation, and storage protein loci, as a principal determinant of cultivar‐specific nitrogen use efficiency in hexaploid wheat, independent of DNA sequence variation, and identifies the rhizosphere microbiome as an integral but ...
Baber Ali, Zeeshan Khan, Nijat Imin
wiley   +1 more source

1644 metagenome-assembled genomes from spatiotemporal samplings in the Changjiang Estuary and adjacent East China Sea

1644 metagenome-assembled genomes from spatiotemporal samplings in the Changjiang Estuary and adjacent East China ...
Shujing Liu (18008161)
core   +1 more source

Compartment‐Specific Functional and Taxonomic Responses of Plant Growth‐Promoting Microbiomes Following Oxytetracycline Trunk Injection in Citrus

Journal of Sustainable Agriculture and Environment, Volume 5, Issue 3, September 2026.
ABSTRACT Huanglongbing (HLB), caused by Candidatus Liberibacter asiaticus, is the most destructive disease affecting citrus production worldwide. Trunk injection of oxytetracycline (OTC) is increasingly used to suppress the pathogen and improve tree performance, yet its ecological consequences for plant‐associated microbiomes remain poorly understood ...
Antonio Castellano‐Hinojosa, Jesús González‐López, Sarah L. Strauss, Ute Albrecht   +3 more
wiley   +1 more source