Results 131 to 140 of about 537,462 (223)

1644 metagenome-assembled genomes from spatiotemporal samplings in the Changjiang Estuary and adjacent East China Sea

1644 metagenome-assembled genomes from spatiotemporal samplings in the Changjiang Estuary and adjacent East China ...
Shujing Liu (18008161)
core   +1 more source

The Promise and Limitations of Metabolic Trait Prediction Across Diverse Bacteria

Environmental Microbiology, Volume 28, Issue 11, November 2026.
Predicting metabolic capabilities of environmental bacteria holds great promise for microbial ecology, but the reliability of available tools is often unclear. This perspective suggests that phenotype predictions are often inaccurate in surprising ways, which makes experimental phenotyping essential for accurate ecological modelling. ABSTRACT Metabolic
Matti Gralka
wiley   +1 more source

Reprogramming Native Cryptic Plasmids Enables Antibiotic‐Selection‐Free Urate Degradation by Escherichia coli Nissle 1917

Microbial Biotechnology, Volume 19, Issue 11, November 2026.
Reprogramming native cryptic plasmids of Escherichia coli Nissle 1917 enabled antibiotic‐selection‐free and oxygen‐adaptive urate degradation. The engineered strain reduced uric acid levels and alleviated hyperuricemia‐associated renal and inflammatory abnormalities in mice, supporting endogenous plasmid engineering as a strategy for live ...
Yuan Chi, Shiying Wu, Fei Lin, Tingwen Fan, Hongwei Liu, Huaiyi Yang   +5 more
wiley   +1 more source

Metagenome-assembled genomes from irradiated human dental plaque

Microbiology Resource Announcements
ABSTRACT We provide 309 quality-controlled bacterial metagenome-assembled genomes recovered from supragingival plaque metagenomes. Samples were collected from head and neck cancer patients following radiotherapy, so the recovered genomes can be useful to investigate the effects of oral cavity irradiation on oral ...
Romualdo M. Filho, Claudia Mengoni, Julia S. Bruno, Eduardo R. Fregnani, Nicola Segata, Anamaria A. Camargo, Vitor Heidrich   +6 more
openaire   +2 more sources

Twelve new metagenome-assembled genomes from non-axenic culture of Griffithsia monilis (Rhodophyta)

We report 12 metagenome-assembled genomes from a non-axenic culture of the red alga Griffithsia monilis Harvey, some of which are distantly related to publicly available ...
Gunn, Laura,, Li, Fay-Wei,, Rizzieri, Yanã C., Lipari, August,, Gunn, Laura, Li, Fay-Wei, Lipari, August, Rizzieri, Yanã C.,   +7 more
core   +1 more source

The Genome and Population Structure of the Spruce Beetle, Dendroctonus rufipennis (Kirby, 1837), a Transcontinental Pest of North American Spruce

Molecular Ecology Resources, Volume 26, Issue 8, November 2026.
ABSTRACT The spruce bark beetle Dendroctonus rufipennis (Family: Curculionidae; Subfamily Scolytinae) is a major forest insect pest throughout the transcontinental range of spruce species (Picea spp.) in North America. Here, we present an annotated, near chromosome‐level, genome assembly of 271 Mb, with 86% of the assembly contained in 16 ...
Erin O. Campbell, Philip D. Batista, Véronique Lévesque‐Tremblay, Catherine Béliveau, Kathia Bernier, Kateryna Romanenko, Ward B. Strong, Katherine P. Bleiker, Dezene P. W. Huber, Christopher I. Keeling   +9 more
wiley   +1 more source

kMetaShot: a fast and reliable taxonomy classifier for metagenome-assembled genomes

Briefings in Bioinformatics
Abstract The advent of high-throughput sequencing (HTS) technologies unlocked the complexity of the microbial world through the development of metagenomics, which now provides an unprecedented and comprehensive overview of its taxonomic and functional contribution in a huge variety of macro- and micro-ecosystems.
Giuseppe Defazio, Marco Antonio Tangaro, Graziano Pesole, Bruno Fosso   +3 more
openaire   +4 more sources

A phenotype‐based framework to measure functional redundancy in microbial ecosystems

Methods in Ecology and Evolution, Volume 17, Issue 11, Page 3118-3135, November 2026.
Abstract Functional redundancy is a key biological concept that offers critical insights into microbial ecosystem stability and responses to environmental perturbations. Existing methods to quantify redundancy typically rely on gene annotations as functional units, limiting their ability to capture complex or partially characterised traits and making ...
Sofia Fraulini, Davide Sanguineti, Guido Zampieri, Laura Treu, Stefano Campanaro   +4 more
wiley   +1 more source

Archaeal Genes Code for GGDEF Domain Proteins With Diguanylate Cyclase Activity

Molecular Microbiology, Volume 126, Issue 5, Page 576-595, November 2026.
A biofilm‐like mode of growth is hypothesized to be required for the emergence of cellular life. Occurrence of common biofilm gene products in current Bacteria and Archaea is an indication for their previous presence in the last universal common ancestor LUCA and perhaps even in the first universal common ancestor FUCA.
Roman Sidorov, Li Li, Ali Dadvar, Irfan Ahmad, Stefan Spring, Jörg Overmann, Ute Römling   +6 more
wiley   +1 more source

You'll never dry alone: cross‐kingdom metabolic coupling supports the desiccation resilience in a macroalgal holobiont

New Phytologist, Volume 252, Issue 5, Page 1700-1701, December 2026.
José Flores‐Uribe
wiley   +1 more source