Results 131 to 140 of about 503,920 (237)
Advanced Science, Volume 13, Issue 51, 14 September 2026.An optimized single‐cell transcriptomic framework profiles over 60 000 cells to map the ovine rumen microbiome, partitioning the ecosystem into seven cross‐species functional clusters. In heat‐resistant hosts, a lineage‐specific metabolic shift in Anaerovibrio lipolyticus toward a highly glycolytic phenotype contributes to a “nutritional sparing ...
Sanbao Zhang +8 more
wiley +1 more source
Deep underground metagenome-assembled genomes from hydrothermal spring
Microbiology Resource AnnouncementsABSTRACT We report 19 metagenome-assembled genomes from a deep underground microbial community found in mineralized hydrothermal spring in the Baksan Neutrino Observatory tunnel. The community is predominantly occupied by members of Pseudomonadota (Gamma-, Beta-, and Alphaproteobacteria), Planctomycetota, Myxococcota,
Kirill Tarasov +3 more
openaire +2 more sources
Advanced Science, Volume 13, Issue 53, 24 September 2026.An STI‐guided metagenomic association framework links soybean salt‐tolerance phenotypes with rhizosphere microbiome composition and network organization in natural saline soils. The approach identifies candidate beneficial taxa, including Thalassospira xiamenensis, and provides an efficient strategy for mining stress‐protective microbes from native ...
Yu Luo +3 more
wiley +1 more source
kMetaShot: a fast and reliable taxonomy classifier for metagenome-assembled genomes
Briefings in BioinformaticsAbstract The advent of high-throughput sequencing (HTS) technologies unlocked the complexity of the microbial world through the development of metagenomics, which now provides an unprecedented and comprehensive overview of its taxonomic and functional contribution in a huge variety of macro- and micro-ecosystems.
Giuseppe Defazio +3 more
openaire +4 more sources
Recovery and quality estimation of metagenomic assembled genomes of eukaryotes
, 2022 Microorganisms are found in virtually all environments, and while the majority of microorganisms are often prokaryotes, by biomass there are suspected to be 6 times more prokaryotes than fungi globally (Bar-On et al., 2018), eukaryotes are also important constituents of microbial communities (e.g on the human skin).
openaire +2 more sources
The Oral Microbiome of King Richard III of England
American Journal of Biological Anthropology, Volume 191, Issue 1, September 2026.ABSTRACT Objectives Metagenomic investigations of ancient dental calculus provide insights into oral health, disease, and diet. Here, we analyze the dental calculus metagenome of King Richard III of England (1452–1485). Materials and Methods Dental calculus DNA was extracted from three teeth of King Richard III and shotgun sequenced to a depth of ...
Irina M. Velsko +15 more
wiley +1 more source
MicrobiomeBackground The canine microbiome is a vastly understudied area relative to the importance of dogs in society, particularly given the potential importance of the microbiome in veterinary medicine.
Juan Castillo-Fernandez +6 more
doaj +1 more source
Advanced Genetics, Volume 7, Issue 3, September 2026.Microbiome foundation models are framed as a multiscale route from sequence semantics to community ecology, multimodal alignment and future world models. By learning transferable representations across cohorts, habitats and perturbations, this roadmap highlights how microbiome AI can move beyond association‐driven analysis toward interpretable ...
Haohong Zhang, Zixin Kang, Kang Ning
wiley +1 more source
Metagenome-assembled genomes from microbiomes fermenting dairy coproducts
Microbiology Resource AnnouncementsABSTRACT To advance knowledge of microbial communities capable of fermenting agro-industrial residues into value-added products, we report metagenomes of microbial communities from six anaerobic bioreactors that were fed a mixture of ultra-filtered milk permeate and cottage cheese acid whey.
Kevin A. Walters +3 more
openaire +2 more sources