Results 51 to 60 of about 537,462 (223)

HiFi metagenomic sequencing enables assembly of accurate and complete genomes from human gut microbiota

open access: yesNature Communications, 2022
Here, the authors construct 102 complete metagenome-assembled genomes (cMAGs) from Pacific Biosciences (PacBio) high-accuracy long-read (HiFi) metagenomic sequencing, showing as high nucleotide accuracy as reference genomes and revealing that regions ...
Chan Yeong Kim, Junyeong Ma, Insuk Lee
doaj   +1 more source

Metagenome-assembled genomes from <i>Spartina alterniflora</i> salt marsh roots and sediments along the U.S. Atlantic coast. [PDF]

open access: yesMicrobiol Resour Announc
Spartina alterniflora is the dominant plant in low-elevation salt marshes along the U.S. Atlantic coast. Here, we present 434 metagenome-assembled genomes assembled from 36 metagenomic libraries of S ...
Rolando JL   +3 more
europepmc   +2 more sources

Metagenome Assembled Genomes

open access: yes, 2020
Metagenome Assembled Genomes (MAGs) from 16 Australian and 24 Global soils. For sample metadata see Supplementary Table 2 and for MAG metadata and taxonomic affiliation see Supplementary Table ...
Sean Bay (9224222)
core   +1 more source

179 high quality metagenome-assembled genomes sequences and annotations

open access: yes, 2022
We analyzed seven sediment samples collected adjacent to ferromanganese nodules from the Clarion–Clipperton Fracture Zone (CCFZ) in the eastern Pacific Ocean.
Zheng,Jinshui, Li,Xudong, Zhang,Dechao
core   +1 more source

Metagenome-Assembled Genomes Contribute to Unraveling of the Microbiome of Cocoa Fermentation

open access: yesApplied and Environmental Microbiology, 2021
The production of chocolate starts with the harvesting of cocoa fruits and the spontaneous fermentation of the seeds in a microbial succession that depends on yeasts, lactic acid bacteria, and acetic acid bacteria in order to eliminate bitter and astringent compounds present in the raw material, which will be further roasted and grinded to originate ...
O. G. G. Almeida, E. C. P. De Martinis
openaire   +3 more sources

Metagenomic Assembly and Prokaryotic Metagenome-Assembled Genome Sequences from the Northern Gulf of Mexico “Dead Zone”

open access: yesMicrobiology Resource Announcements, 2018
Coastal regions experiencing declining dissolved oxygen are increasing in number and severity around the world. However, despite the importance of microbial metabolism in coastal hypoxia, few metagenomic surveys exist.
Thrash, J Cameron   +8 more
openaire   +5 more sources

Insights into rumen microbial biosynthetic gene cluster diversity through genome-resolved metagenomics

open access: yesCommunications Biology, 2021
Anderson and Fernando use metagenomic binning approaches to reconstruct 2,809 microbial metagenome-assembled genomes from ruminants, and perform phylogenomic analyses on the biosynthetic gene clusters from over 8,000 total rumen microbial genomes.
Christopher L. Anderson   +1 more
doaj   +1 more source

North Sea spring bloom-associated Gammaproteobacteria fill diverse heterotrophic niches

open access: yesEnvironmental Microbiome, 2021
Background The planktonic bacterial community associated with spring phytoplankton blooms in the North Sea is responsible for a large amount of carbon turnover in an environment characterised by high primary productivity.
Ben Francis   +4 more
doaj   +1 more source

Borup Fiord Pass - Metagenome Assembled Genomes (MAGs)

open access: yes, 2020
These are the Metagenome Assembled Genomes generated and presented for a publication in preparation to AEM.These data were generated from samples collected at Borup Fiord Pass between 2014 and ...
Christopher Trivedi (7342979)
core   +1 more source

Metagenome-Assembled Genome Sequences of a Biofilm Derived from Marsberg Copper Mine

open access: yes, 2021
We sequenced the metagenome of a biofilm collected near a leachate stream of the Marsberg copper mine (Germany) and reconstructed eight metagenome-assembled genomes.
Nacke, Heiko   +5 more
core   +1 more source

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