Results 31 to 40 of about 503,920 (237)
Metagenome assembled rumen-uncultured genomes (RUGs)
, 2020 DNA was sequenced from rumen contents from cattle, sheep, red deer and reindeer. We constructed 391 metagenome assembled rumen-uncultured genomes (RUGs).Glendinning, Laura. (2019).
Glendinning, Laura; id_orcid +1 more
core +2 more sources
Dissecting the role of the human microbiome in COVID-19 via metagenome-assembled genomes
Nature Communications, 2022 Here, using whole-metagenome shotgun sequencing data from patients with COVID-19 and controls, the authors reconstruct 11,584 microbial metagenome-assembled genomes (MAGs) including 5,403 non-redundant MAGs, revealing microbiota and metabolic pathways ...
Shanlin Ke, Scott T. Weiss, Yang-Yu Liu
doaj +1 more source
Catalog of metagenome-assembled genomes of prokaryotic communities from the Red Sea hydrothermal vents. [PDF]
Microbiol Resour AnnouncThis study presents medium- and high-quality prokaryotic metagenome-assembled genomes (MAGs) from microbial mats and sediments at Hatiba Mons, a Red Sea hydrothermal system. We recovered 1,217 bacterial and archaeal MAGs across 75 phyla, dominated by
Schultz J +4 more
europepmc +2 more sources
ResMiCo: Increasing the quality of metagenome-assembled genomes with deep learning
PLOS Computational Biology, 2022 The number of published metagenome assemblies is rapidly growing due to advances in sequencing technologies. However, sequencing errors, variable coverage, repetitive genomic regions, and other factors can produce misassemblies, which are challenging to detect for taxonomically novel genomic data.
Olga Mineeva +5 more
openaire +7 more sources
Characterization of metagenome-assembled genomes from the International Space Station
Microbiome, 2022 Abstract Background Several investigations on the microbial diversity and functional properties of the International Space Station (ISS) environment were carried out to understand the influence of spaceflight conditions on the microbial population.
Nitin K. Singh +6 more
openaire +3 more sources
A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters [PDF]
PeerJ, 2021 Marine microorganisms contribute to the health of the global ocean by supporting the marine food web and regulating biogeochemical cycles. Assessing marine microbial diversity is a crucial step towards understanding the global ocean.
Clara Jégousse +4 more
doaj +2 more sources
, 2021 114 metagenome assembled genomes recovered from metagenomic sequencing reads of 5 pig faecal samples. A Each MAG represents a representative genome from the complete catalogue dereplicated at 99% ANI.
Rachel Gilroy (9382541)
core +1 more source
Nature Communications, 2021 Here, the authors analyze 4907 Circular Metagenome Assembled Genomes from human microbiomes and identify and characterize nearly 600 diverse genomes of crAss-like phages, finding two putative families with unusual genomic features, including high density
Natalya Yutin +8 more
doaj +1 more source
Metagenome-assembled genomes of Macrocystis-associated bacteria. [PDF]
Microbiol Resour AnnouncABSTRACT Microbes are important for the development of kelp, but little is understood about the functions encoded by these microbes. Here, we assembled 1,794 metagenome-associated genomes (MAGs) from bacteria that colonize gametophytes of the giant kelp Macrocystis pyrifera .
Aguirre EG, Schwartzman JA.
europepmc +3 more sources
Metagenome-Assembled Genomes from Appalachian Acid Mine Drainage Sites [PDF]
, 2023 Here, we report 7 metagenome-assembled genomes (MAGs) isolated from acid mine drainage sites in the eastern United States. Three genomes are Archaea, including two from the phylum Thermoproteota and one from Euryarchaeota.
Christen Grettenberger +5 more
core +1 more source