Results 71 to 80 of about 1,283,302 (227)

metagenome-atlas/atlas: Toiminnot

, 2021
This is a major update of metagenome-atlas. It was developed for the 3-day course in Finnland, that's also why it has a finish release name. What is new?
Silas Kieser, Richard Allen White III, Joe Brown, Vladimir Mikryukov, Yan Hui, Jackson M. Tsuji, Christopher Bottoms, Sean M. Colby, wangzc, Chris Overall, Mattias de Hollander, C. Titus Brown, Colin Brislawn   +12 more
core   +1 more source

Polyphenol‐Inspired Materials for Agricultural Applications

Advanced Materials, EarlyView.
This review outlines the use of polyphenol‐inspired materials for sustainable agriculture, highlighting their molecular design, interfacial assembly, structure–property relationships, and prospects toward precision agriculture, climate resilience, ecosystem protection, and circular bioeconomy strategies.
Haofu Liu, Omid Mazaheri, Zhixing Lin, Tianzheng Wang, Jingqu Chen, Yuang Gu, Xia Liang, Deli Chen, Frank Caruso   +8 more
wiley   +1 more source

MEGGASENSE – The Metagenome/Genome Annotated Sequence Natural Language Search Engine: A Platform for the Construction of Sequence Data Warehouses

Food Technology and Biotechnology, 2017
The MEGGASENSE platform constructs relational databases of DNA or protein sequences. The default functional analysis uses 14 106 hidden Markov model (HMM) profiles based on sequences in the KEGG database.
Ranko Gacesa, Jurica Zucko, Solveig K. Petursdottir, Elisabet Eik Gudmundsdottir, Olafur H. Fridjonsson, Janko Diminic, Paul F. Long, John Cullum, Daslav Hranueli, Gudmundur O. Hreggvidsson, Antonio Starcevic   +10 more
doaj   +1 more source

Pseudomyrmex nigropilosus larval metagenome assembly

, 2018
Assembly of the metagenome obtained from dissected meconia of Pseudomyrmex nigropilosus larvae from colony BER0554.
Stefanie Kautz (161688), Kautz, Stefanie, Wray, Brian D., Benjamin E. R. Rubin (173233), Moreau, Corrie S., Corrie S. Moreau (111971), Brian D. Wray (5625629), Rubin, Benjamin E. R.   +7 more
core   +1 more source

Metagenome-assembled genomes of Cyanobacteria in cryoconite

, 2022
These data are associated with the manuscript "Metagenomics reveals global-scale contrasts in nitrogen cycling and cyanobacterial light harvesting mechanisms in glacier cryoconite".
Takumi Murakami (10828728)
core   +1 more source

Metagenomes and metagenome-assembled genomes from Onthophagus taurus

Microbiology Resource Announcements
ABSTRACT Shotgun metagenomic sequencing was carried out on Onthophagus taurus larval gut sections, female adult midguts, and pedestals (a maternally provisioned fecal pellet provided to offspring).
Joshua A. Jones, Armin P. Moczek, Irene L. G. Newton   +2 more
openaire   +2 more sources

A Comprehensive Microbial Gene Catalog of the Human Airway Microbiome Across Anatomical Sites and Geographic Regions

Advanced Science, EarlyView.
An integrated Human Airway Microbiome Gene Catalog (iHAMGC) is constructed from 12,273 metagenomic airway samples, providing a high‐resolution reference of respiratory microbial genes. The catalog enables systematic exploration of taxonomic and functional variation across airway niches and geographic regions, revealing site‐specific and region ...
Qing Zhang, Dashu Li, Bo Liu, Yue Zhang, Min Li, Ruochun Guo, Yawen Ni, Shibin Chen, Biao Ni, Lijie Qiu, Guorui Xing, He Dong, Qiulong Yan, Shenghui Li, Xiaohui Zou, Bin Cao   +15 more
wiley   +1 more source

From short to long: The impact of read length on metagenome assembly and binning

Methods in Ecology and Evolution
Metagenome sequencing not only plays a pivotal role in unravelling the genetic diversity and functional potential of microbial communities but also facilitates the discovery of genome context for microbial dark matter.
Xi Peng, Xingsheng Yang, Danrui Wang, Bo Zhao, Kai Feng, Qing He, Shang Wang, Ye Deng   +7 more
doaj   +1 more source

Pseudomyrmex flavicornis adult metagenome assembly

, 2018
Assembly of the metagenome obtained from dissected guts of adult Pseudomyrmex flavicornis from colony BER0517.
Stefanie Kautz (161688), Kautz, Stefanie, Wray, Brian D., Benjamin E. R. Rubin (173233), Moreau, Corrie S., Corrie S. Moreau (111971), Brian D. Wray (5625629), Rubin, Benjamin E. R.   +7 more
core   +1 more source

metagenome-atlas/atlas: Fix eggNOGmapper

, 2020
ATLAS - Three commands to start analysing your metagenome ...
Silas Kieser, Jackson M. Tsuji, Richard Allen White III, Christopher Bottoms, Joe Brown, Sean M. Colby, Vladimir Mikryukov, wangzc, Chris Overall, Mattias de Hollander, C. Titus Brown, Colin Brislawn   +11 more
core   +1 more source