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The microbiologist's guide to metaproteomics [PDF]
iMetaMetaproteomics is an emerging approach for studying microbiomes, offering the ability to characterize proteins that underpin microbial functionality within diverse ecosystems.
Tim Van Den Bossche +31 more
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iMetaLab Suite: A one‐stop toolset for metaproteomics
iMeta, 2022 Metaproteomics is a recently thriving technique that studies the collection of proteins in complex microbiomes of the human, animal, plant, and environment.
Leyuan Li +5 more
doaj +2 more sources
Computational and Structural Biotechnology Journal, 2023 Metaproteomics is a relatively young field that has only been studied for approximately 15 years. Nevertheless, it has the potential to play a key role in disease research by elucidating the mechanisms of communication between the human host and the ...
Nobuaki Miura, Shujiro Okuda
doaj +3 more sources
Microbiology Spectrum, 2021 A critical step in studies of the intestinal microbiome using meta-omics approaches is the preservation of samples before analysis. Preservation is essential for approaches that measure gene expression, such as metaproteomics, which is used to identify ...
Angie Mordant, Manuel Kleiner
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Metaproteomics reveals age-specific alterations of gut microbiome in hamsters with SARS-CoV-2 infection [PDF]
Gut MicrobesThe gut microbiome’s pivotal role in health and disease is well established. SARS-CoV-2 infection often causes gastrointestinal symptoms and is associated with changes of the microbiome in both human and animal studies.
Marybeth Creskey +14 more
doaj +2 more sources
Alternatives Integrating Omics Approaches for the Advancement of Human Skin Models: A Focus on Metagenomics, Metatranscriptomics, and Metaproteomics [PDF]
MicroorganismsThe human skin microbiota, a complex community of bacterial, fungal, and viral organisms, plays a crucial role in maintaining skin homeostasis and regulating host-pathogen interactions.
Estibaliz Fernández-Carro +5 more
doaj +2 more sources
Multi-Metaomics Unveils the Development Process of Microbial Communities During the Fermentation of Baobaoqu [PDF]
FoodsIn order to understand the dynamic interaction process among species, enzymes, and metabolites during the fermentation process of Baobaoqu, which is a representative Daqu starter for Chinese baijiu, the intimate connection between the progression of ...
Qingchun Luo +15 more
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MetaPep: A core peptide database for faster human gut metaproteomics database searches
Computational and Structural Biotechnology Journal, 2023 Metaproteomics has increasingly been applied to study functional changes in the human gut microbiome. Peptide identification is an important step in metaproteomics research, with sequence database search (SDS) and spectral library search (SLS) as the two
Zhongzhi Sun +6 more
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Microbiome, 2021 Through connecting genomic and metabolic information, metaproteomics is an essential approach for understanding how microbiomes function in space and time.
Tim Van Den Bossche +18 more
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Periodontology 2000, EarlyView., 2023 Abstract This narrative review summarizes the collective knowledge on periodontal microbiology, through a historical timeline that highlights the European contribution in the global field. The etiological concepts on periodontal disease culminate to the ecological plaque hypothesis and its dysbiosis‐centered interpretation.
Georgios N. Belibasakis +5 more
wiley +1 more source