Results 111 to 120 of about 7,727 (208)

Metagenomics for Bacteriology [PDF]

, 2015
The study of bacteria, or bacteriology, has gone through transformative waves since its inception in the 1600s. It all started by the visualization of bacteria using light microscopy by Antonie van Leeuwenhoek, when he first described “animalcules ...
del Castillo, Erika, Izard, Jacques
core   +1 more source

Microbial metatranscriptomics in a permanent marine oxygen minimum zone [PDF]

, 2010
Simultaneous characterization of taxonomic composition, metabolic gene content and gene expression in marine oxygen minimum zones (OMZs) has potential to broaden perspectives on the microbial and biogeochemical dynamics in these environments.
Andrade, Canfield, Carlson, Castro-González, Church, Codispoti, Daneri, DeLong, Dhillon, Diaz, Erguder, Farías, Farías, Frias-Lopez, Fuchs, Galán, Gomez-Alvarez, Hallam, Hallam, Hamersley, Hewson, Hewson, Jayakumar, Jensen, Jetten, Kartal, Kartal, Kartal, Konneke, Konstantinidis, Kuenen, Kuwahara, Kuypers, Kuypers, Labrenz, Lam, Lam, Lavik, Leigh, Li, Martens-Habbena, McCarren, Meyer, Meyer, Molina, Molina, Molina, Molina, Newton, Poretsky, Poretsky, Preston, Prosser, Revsbech, Schleper, Schmidt, Shi, Snel, Sowell, Stevens, Stewart, Stramma, Strous, Taniguchi, Thamdrup, Ulloa, Urich, Walker, Walsh, Ward, Weidinger, Woebken, Wuchter, Zaikova   +73 more
core   +1 more source

Fructose catabolism and its metabolic effects: Exploring host–microbiota interactions and the impact of ethnicity

The Journal of Physiology, Volume 603, Issue 24, Page 7661-7681, December 15, 2025.
Abstract figure legend This graphical abstract is a schematic representation highlighting the interactions between dietary fructose, gut microbiota and ethnicity in shaping metabolic health. Abstract Important health disparities are observed in the prevalence of obesity and associated non‐communicable diseases (NCDs), including type 2 diabetes (T2D ...
Florine H.M. Westerbeke, Melany Rios‐Morales, Ilias Attaye, Max Nieuwdorp   +3 more
wiley   +1 more source

CLAE: A High‐Fidelity Nanopore Sequencing Strategy for Read‐Level Viral Variant Detection and Environmental RNA Virus Discovery

Advanced Science, Volume 12, Issue 44, November 27, 2025.
High‐fidelity Nanopore sequencing offers a cost‐effective, portable path to uncovering viral dark matter in complex environments—but suffers from severe read‐length bias, low throughput, and limited accuracy. This study traces these limitations to core biochemical barriers and introduces CLAE, a foundational high‐fidelity platform that enables accurate,
Hannah Yu, Sarah Golconda, Ga‐Eun Lee, Dantong Xue, Guillermo Domínguez‐Huerta, James M. Wainaina, Benjamin Bolduc, Shashanka Murthy, Shihyoung Kim, Seth Faith, Shan‐Lu Liu, Jiyoung Lee, Michael Oglesbee, Matthew B Sullivan, Sanggu Kim   +14 more
wiley   +1 more source

Transcriptionally Active Lung Microbiome and Its Association with Bacterial Biomass and Host Inflammatory Status

mSystems, 2018
Alteration of the lung microbiome has been observed in several respiratory tract diseases. However, most previous studies were based on 16S ribosomal RNA and shotgun metagenome sequencing; the viability and functional activity of the microbiome, as well ...
Lili Ren, Rongbao Zhang, Jian Rao, Yan Xiao, Zhao Zhang, Bin Yang, Depan Cao, Hui Zhong, Pu Ning, Ying Shang, Mingkun Li, Zhancheng Gao, Jianwei Wang   +12 more
doaj   +1 more source

The Trait Repertoire Enabling Cyanobacteria to Bloom Assessed through Comparative Genomic Complexity and Metatranscriptomics

mBio, 2020
Water bloom development due to eutrophication constitutes a case of niche specialization among planktonic cyanobacteria, but the genomic repertoire allowing bloom formation in only some species has not been fully characterized.
Huansheng Cao, Yohei Shimura, Morgan M. Steffen, Zhou Yang, Jingrang Lu, Allen Joel, Landon Jenkins, Masanobu Kawachi, Yanbin Yin, Ferran Garcia-Pichel   +9 more
doaj   +1 more source

Metatranscriptome analysis of the reef-building coral Orbicella faveolata indicates holobiont response to coral disease [PDF]

, 2015
White Plague Disease (WPD) is implicated in coral reef decline in the Caribbean and is characterized by microbial community shifts in coral mucus and tissue.
Arif, Chatchanit, Baumgarten, Sebastian, Bayer, Till, Daniels, Camille A., Michell, Craig T., Roder, Cornelia, Voolstra, Christian R., Weil, Ernesto, Yum, Lauren K.   +8 more
core   +2 more sources

“Fecal microbiome in epidemiologic studies” - Letter [PDF]

, 2016
We congratulate Sinha et al. on their recent report (1) comparing fecal sample collection methods for epidemiologic studies of the gut microbiome. These data contribute to the increasing body of literature describing robust methodological frameworks for ...
Abu-Ali, Galeb, Chan, Andrew T., Drew, David A., Huttenhower, Curtis, Izard, Jacques, Lochhead, Paul   +5 more
core   +2 more sources

Unraveling the lung metatranscriptome in HCT [PDF]

Blood, 2021
Alpana Waghmare, Sina A. Gharib
openaire   +2 more sources

Microcystis bloom control using hydrogen peroxide and floating sodium percarbonate algaecide Lake Guard Oxy in Florida

Applied and Environmental Microbiology
Harmful algal blooms (HABs) pose a critical threat to aquatic ecosystems, human health, and economies globally, necessitating effective mitigation strategies.
Taylor L. Hancock, Elizabeth K. Dahedl, Hidetoshi Urakawa   +2 more
doaj   +1 more source